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Remove "$" from code blocks #26

@erinyoung

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@erinyoung

This is probably the lazy part of me, but the code blocks in your readme documents start with "$". This means that they cannot simply be copy and pasted.

I request (for laziness sake) that code blocks shift from this

$ nextflow run neissflow/main.nf -profile singularity,all,test --outdir <OUTDIR> --name <RUN NAME>

to this

nextflow run neissflow/main.nf -profile singularity,all,test --outdir <OUTDIR> --name <RUN NAME>

(the latter can be copied and pasted with the mouse icon)

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