From dcf44024d9741ea48da979f5b09296f67cbdef26 Mon Sep 17 00:00:00 2001 From: Meaghan Kennedy Ng Date: Mon, 7 Aug 2023 10:03:02 -0400 Subject: [PATCH] Update README.md Modify typo by changing "seekr_pearson_distro" to "seekr_visualize_distro" in README (the former does not exist). --- README.md | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/README.md b/README.md index e7b3c93..a0596b8 100644 --- a/README.md +++ b/README.md @@ -276,7 +276,7 @@ $ seekr_graph example_vs_self.csv .13 -g example.gml -c communities.csv The value for thresholding the adjacency matrix is very experiment dependent. Because a reasonable default is difficult to predict, it is a required parameter. For example, if you are using `k=5`, it likely makes sense to increase the threshold (e.g. to .3). -`seekr_pearson_distro` can be run to suggest a value for the threshold. +`seekr_visualize_distro` can be run to suggest a value for the threshold. Similarly, the community finding algorithm allows you course control of community size with its resolution parameter (gamma). Testing ranges from .1 to 5 is reasonable, where values from 1-3 have been most useful in our experience.