[BUG] IsoAnnotLite assigns transcript ID as protein ID #500
Description
Is there an existing issue for this?
- I have searched the existing issues
Have you loaded the SQANTI3.env conda environment?
- I have loaded the SQANTI3.env conda environment
Problem description
IsoAnnotLite assigns the transcript ID also as ID to the corresponding protein. This causes different transcripts that produce the exact same identical protein to have different protein IDs. This causes problems downstream e.g. that tappAS expression analyses at the CDS level are the same as at the transcript level.
Code sample
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Error
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Anything else?
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