alignment with gzipped input

[ycl6]

In the provided user guide (v 0.1.83), the example command to use when input is from a gzipped file is given as:

$ zcat myqueries.fa.gz | yaha -q stdin -x hg18_full.X15_01_65525S

So I tried it like this:

$ zcat myqueries.fq.gz | yaha -q stdin -x X15_01_65525S -oss myqueries.bam -t 10

But that didn't work with YAHA v 0.1.83. I played with the command a bit and found the correct command as below (with -q stdin removed):

$ zcat myqueries.fq.gz | yaha -x X15_01_65525S -oss myqueries.bam -t 10