Creation a SIMLIB fail on LINCC framework

[anibal-art]

I try to install the software on LSST LINCC framework

Steps to reproduce the behavior:

1. Clone the repository

2. Modify the script "pip-requirements.txt" in the install folder
   from this pytest=3.2.5 pytest-cov python-coveralls coverage=4.5.4 matplotlib future numpy pandas to this pytest==3.2.5 pytest-cov python-coveralls coverage==4.5.4 matplotlib future numpy pandas

3. Run in \OpSimSummary : $bash ./install/install_all.sh

4. Then when has been installed I run this line make_simlibs.py --dbname baseline_v2.0_10yrs.db --data_root /Users/user_name/Downloads --opsimversion fbsv2 with my directories of course.

Then the follow error arise
(base) anibal-art@lincc-anibal-2dart:~/OpSimSummary/scripts$ python make_simlibs.py --dbname baseline_v2.0_10yrs.db --data_root /home/anibal-art --opsimversion fbsv2 /opt/conda/lib/python3.9/site-packages/scipy/__init__.py:146: UserWarning: A NumPy version >=1.16.5 and <1.23.0 is required for this version of SciPy (detected version 1.23.1 warnings.warn(f"A NumPy version >={np_minversion} and <{np_maxversion}" Traceback (most recent call last): File "/home/anibal-art/OpSimSummary/scripts/make_simlibs.py", line 11, in <module> import healpy as hp File "/opt/conda/lib/python3.9/site-packages/healpy/__init__.py", line 93, in <module> from .rotator import Rotator, vec2dir, dir2vec File "/opt/conda/lib/python3.9/site-packages/healpy/rotator.py", line 25, in <module> from astropy.coordinates import SkyCoord File "/opt/conda/lib/python3.9/site-packages/astropy/coordinates/__init__.py", line 10, in <module> from .angles import * File "/opt/conda/lib/python3.9/site-packages/astropy/coordinates/angles.py", line 14, in <module> from . import angle_formats as form File "/opt/conda/lib/python3.9/site-packages/astropy/coordinates/angle_formats.py", line 30, in <module> from astropy import units as u File "/opt/conda/lib/python3.9/site-packages/astropy/units/__init__.py", line 17, in <module> from .quantity import * File "/opt/conda/lib/python3.9/site-packages/astropy/units/quantity.py", line 32, in <module> from .quantity_helper import (converters_and_unit, can_have_arbitrary_unit, File "/opt/conda/lib/python3.9/site-packages/astropy/units/quantity_helper/__init__.py", line 10, in <module> from . import helpers, function_helpers File "/opt/conda/lib/python3.9/site-packages/astropy/units/quantity_helper/function_helpers.py", line 116, in <module> np.asscalar, np.alen, File "/home/anibal-art/.local/lib/python3.9/site-packages/numpy/__init__.py", line 311, in __getattr__ raise AttributeError("module {!r} has no attribute " AttributeError: module 'numpy' has no attribute 'asscalar'

The packages installed in Conda are
`(base) anibal-art@lincc-anibal-2dart:~/OpSimSummary/scripts$ conda list

packages in environment at /opt/conda:

Name Version Build Channel

_libgcc_mutex 0.1 conda_forge conda-forge
_openmp_mutex 4.5 1_gnu conda-forge
abseil-cpp 20210324.2 h9c3ff4c_0 conda-forge
aiohttp 3.8.1 py39h3811e60_0 conda-forge
aiosignal 1.2.0 pyhd8ed1ab_0 conda-forge
alembic 1.6.5 pyhd8ed1ab_0 conda-forge
alsa-lib 1.2.3 h516909a_0 conda-forge
anyio 3.3.0 py39hf3d152e_0 conda-forge
argon2-cffi 20.1.0 py39h3811e60_2 conda-forge
arrow-cpp 6.0.1 py39h01fd06f_8_cpu conda-forge
astropy 5.0 py39hce5d2b2_0 conda-forge
async-timeout 4.0.2 pyhd8ed1ab_0 conda-forge
async_generator 1.10 py_0 conda-forge
attrs 21.2.0 pyhd8ed1ab_0 conda-forge
aws-c-cal 0.5.11 h95a6274_0 conda-forge
aws-c-common 0.6.2 h7f98852_0 conda-forge
aws-c-event-stream 0.2.7 h3541f99_13 conda-forge
aws-c-io 0.10.5 hfb6a706_0 conda-forge
aws-checksums 0.1.11 ha31a3da_7 conda-forge
aws-sdk-cpp 1.8.186 hb4091e7_3 conda-forge
babel 2.9.1 pyh44b312d_0 conda-forge
backcall 0.2.0 pyh9f0ad1d_0 conda-forge
backports 1.0 py_2 conda-forge
backports.functools_lru_cache 1.6.4 pyhd8ed1ab_0 conda-forge
bleach 4.0.0 pyhd8ed1ab_0 conda-forge
blinker 1.4 py_1 conda-forge
blosc 1.21.0 h9c3ff4c_0 conda-forge
bokeh 2.4.2 py39hf3d152e_0 conda-forge
brotli 1.0.9 h7f98852_6 conda-forge
brotli-bin 1.0.9 h7f98852_6 conda-forge
brotlipy 0.7.0 py39h3811e60_1001 conda-forge
bzip2 1.0.8 h7f98852_4 conda-forge
c-ares 1.18.1 h7f98852_0 conda-forge
ca-certificates 2021.10.8 ha878542_0 conda-forge
cachetools 4.2.4 pyhd8ed1ab_0 conda-forge
certifi 2021.10.8 py39hf3d152e_1 conda-forge
certipy 0.1.3 py_0 conda-forge
cffi 1.14.6 py39he32792d_0 conda-forge
cfitsio 4.0.0 h9a35b8e_0 conda-forge
chardet 4.0.0 py39hf3d152e_1 conda-forge
charset-normalizer 2.0.0 pyhd8ed1ab_0 conda-forge
click 8.0.3 py39hf3d152e_1 conda-forge
cloudpickle 2.0.0 pyhd8ed1ab_0 conda-forge
colorama 0.4.4 pyh9f0ad1d_0 conda-forge
conda 4.10.3 py39hf3d152e_0 conda-forge
conda-package-handling 1.7.3 py39h3811e60_0 conda-forge
configurable-http-proxy 4.5.0 node14_hfc12e6c_0 conda-forge
cryptography 3.4.7 py39hbca0aa6_0 conda-forge
cycler 0.11.0 pyhd8ed1ab_0 conda-forge
cytoolz 0.11.2 py39h3811e60_1 conda-forge
dask 2022.1.0 pyhd8ed1ab_0 conda-forge
dask-core 2022.1.0 pyhd8ed1ab_0 conda-forge
dask-kubernetes 2022.1.0 pypi_0 pypi
dbus 1.13.6 h48d8840_2 conda-forge
debugpy 1.4.1 py39he80948d_0 conda-forge
decorator 5.0.9 pyhd8ed1ab_0 conda-forge
defusedxml 0.7.1 pyhd8ed1ab_0 conda-forge
distributed 2022.1.0 py39hf3d152e_0 conda-forge
entrypoints 0.3 pyhd8ed1ab_1003 conda-forge
expat 2.4.3 h9c3ff4c_0 conda-forge
fontconfig 2.13.94 ha180cfb_0 conda-forge
fonttools 4.29.0 py39h3811e60_0 conda-forge
freetype 2.10.4 h0708190_1 conda-forge
frozenlist 1.2.0 py39h3811e60_1 conda-forge
fsspec 2022.1.0 pyhd8ed1ab_0 conda-forge
gettext 0.19.8.1 h0b5b191_1005 conda-forge
gflags 2.2.2 he1b5a44_1004 conda-forge
glib 2.68.4 h9c3ff4c_0 conda-forge
glib-tools 2.68.4 h9c3ff4c_0 conda-forge
glog 0.5.0 h48cff8f_0 conda-forge
google-auth 2.3.3 pyh6c4a22f_0 conda-forge
greenlet 1.1.1 py39he80948d_0 conda-forge
grpc-cpp 1.42.0 ha1441d3_1 conda-forge
gst-plugins-base 1.18.5 hf529b03_0 conda-forge
gstreamer 1.18.5 h76c114f_0 conda-forge
hdf5 1.12.1 nompi_h2750804_103 conda-forge
healpy 1.15.2 py39h69e73af_0 conda-forge
heapdict 1.0.1 py_0 conda-forge
icu 68.1 h58526e2_0 conda-forge
idna 3.1 pyhd3deb0d_0 conda-forge
importlib-metadata 4.6.4 py39hf3d152e_0 conda-forge
iniconfig 1.1.1 pyh9f0ad1d_0 conda-forge
ipykernel 6.2.0 py39hef51801_0 conda-forge
ipython 7.26.0 py39hef51801_0 conda-forge
ipython_genutils 0.2.0 py_1 conda-forge
jbig 2.1 h7f98852_2003 conda-forge
jedi 0.18.0 py39hf3d152e_2 conda-forge
jinja2 3.0.1 pyhd8ed1ab_0 conda-forge
jpeg 9d h36c2ea0_0 conda-forge
json5 0.9.5 pyh9f0ad1d_0 conda-forge
jsonschema 3.2.0 pyhd8ed1ab_3 conda-forge
jupyter-desktop-server 0.1.2 pypi_0 pypi
jupyter-resource-usage 0.6.1 pyhd8ed1ab_0 conda-forge
jupyter-server-proxy 3.2.1 pyhd8ed1ab_0 conda-forge
jupyter_client 6.1.12 pyhd8ed1ab_0 conda-forge
jupyter_core 4.7.1 py39hf3d152e_0 conda-forge
jupyter_server 1.10.2 pyhd8ed1ab_0 conda-forge
jupyter_telemetry 0.1.0 pyhd8ed1ab_1 conda-forge
jupyterhub 1.4.2 py39hf3d152e_0 conda-forge
jupyterhub-base 1.4.2 py39hf3d152e_0 conda-forge
jupyterlab 3.1.8 pyhd8ed1ab_0 conda-forge
jupyterlab-system-monitor 0.8.0 pypi_0 pypi
jupyterlab-topbar 0.6.1 pypi_0 pypi
jupyterlab_pygments 0.1.2 pyh9f0ad1d_0 conda-forge
jupyterlab_server 2.7.2 pyhd8ed1ab_0 conda-forge
kiwisolver 1.3.2 py39h1a9c180_1 conda-forge
krb5 1.19.2 hcc1bbae_0 conda-forge
kubernetes-asyncio 19.15.0 pypi_0 pypi
lcms2 2.12 hddcbb42_0 conda-forge
ld_impl_linux-64 2.36.1 hea4e1c9_2 conda-forge
lerc 3.0 h9c3ff4c_0 conda-forge
libarchive 3.5.1 hccf745f_2 conda-forge
libblas 3.9.0 13_linux64_openblas conda-forge
libbrotlicommon 1.0.9 h7f98852_6 conda-forge
libbrotlidec 1.0.9 h7f98852_6 conda-forge
libbrotlienc 1.0.9 h7f98852_6 conda-forge
libcblas 3.9.0 13_linux64_openblas conda-forge
libclang 11.1.0 default_ha53f305_1 conda-forge
libcurl 7.81.0 h2574ce0_0 conda-forge
libdeflate 1.8 h7f98852_0 conda-forge
libedit 3.1.20191231 he28a2e2_2 conda-forge
libev 4.33 h516909a_1 conda-forge
libevent 2.1.10 h9b69904_4 conda-forge
libffi 3.3 h58526e2_2 conda-forge
libgcc-ng 11.2.0 h1d223b6_12 conda-forge
libgfortran-ng 11.2.0 h69a702a_12 conda-forge
libgfortran5 11.2.0 h5c6108e_12 conda-forge
libglib 2.68.4 h3e27bee_0 conda-forge
libgomp 11.2.0 h1d223b6_12 conda-forge
libiconv 1.16 h516909a_0 conda-forge
liblapack 3.9.0 13_linux64_openblas conda-forge
libllvm11 11.1.0 hf817b99_2 conda-forge
libnghttp2 1.43.0 h812cca2_0 conda-forge
libogg 1.3.4 h7f98852_1 conda-forge
libopenblas 0.3.18 pthreads_h8fe5266_0 conda-forge
libopus 1.3.1 h7f98852_1 conda-forge
libpng 1.6.37 h21135ba_2 conda-forge
libpq 13.5 hd57d9b9_1 conda-forge
libprotobuf 3.19.3 h780b84a_0 conda-forge
libsodium 1.0.18 h36c2ea0_1 conda-forge
libsolv 0.7.19 h780b84a_5 conda-forge
libssh2 1.10.0 ha56f1ee_2 conda-forge
libstdcxx-ng 11.2.0 he4da1e4_12 conda-forge
libthrift 0.15.0 he6d91bd_1 conda-forge
libtiff 4.3.0 h6f004c6_2 conda-forge
libutf8proc 2.7.0 h7f98852_0 conda-forge
libuuid 2.32.1 h7f98852_1000 conda-forge
libuv 1.42.0 h7f98852_0 conda-forge
libvorbis 1.3.7 h9c3ff4c_0 conda-forge
libwebp-base 1.2.2 h7f98852_1 conda-forge
libxcb 1.13 h7f98852_1004 conda-forge
libxkbcommon 1.0.3 he3ba5ed_0 conda-forge
libxml2 2.9.12 h72842e0_0 conda-forge
libzlib 1.2.11 h36c2ea0_1013 conda-forge
locket 0.2.0 py_2 conda-forge
lz4-c 1.9.3 h9c3ff4c_1 conda-forge
lzo 2.10 h516909a_1000 conda-forge
mako 1.1.5 pyhd8ed1ab_0 conda-forge
mamba 0.15.3 py39h951de11_0 conda-forge
markupsafe 2.0.1 py39h3811e60_0 conda-forge
matplotlib 3.5.1 py39hf3d152e_0 conda-forge
matplotlib-base 3.5.1 py39h2fa2bec_0 conda-forge
matplotlib-inline 0.1.2 pyhd8ed1ab_2 conda-forge
mistune 0.8.4 py39h3811e60_1004 conda-forge
msgpack-python 1.0.3 py39h1a9c180_0 conda-forge
multidict 6.0.2 py39h3811e60_0 conda-forge
munkres 1.1.4 pyh9f0ad1d_0 conda-forge
mysql-common 8.0.28 ha770c72_0 conda-forge
mysql-libs 8.0.28 hfa10184_0 conda-forge
nb_conda_kernels 2.3.1 py39hf3d152e_1 conda-forge
nbclassic 0.3.1 pyhd8ed1ab_1 conda-forge
nbclient 0.5.4 pyhd8ed1ab_0 conda-forge
nbconvert 6.1.0 py39hf3d152e_0 conda-forge
nbformat 5.1.3 pyhd8ed1ab_0 conda-forge
nbgitpuller 0.10.1 pypi_0 pypi
ncurses 6.2 h58526e2_4 conda-forge
nest-asyncio 1.5.1 pyhd8ed1ab_0 conda-forge
nodejs 14.17.4 h92b4a50_0 conda-forge
nomkl 1.0 h5ca1d4c_0 conda-forge
notebook 6.4.3 pyha770c72_0 conda-forge
nspr 4.32 h9c3ff4c_1 conda-forge
nss 3.72 hb5efdd6_0 conda-forge
numexpr 2.8.0 py39hbd72853_100 conda-forge
numpy 1.22.1 py39h91f2184_0 conda-forge
oauthlib 3.1.1 pyhd8ed1ab_0 conda-forge
olefile 0.46 pyh9f0ad1d_1 conda-forge
openjpeg 2.4.0 hb52868f_1 conda-forge
openssl 1.1.1l h7f98852_0 conda-forge
orc 1.7.2 h1be678f_0 conda-forge
packaging 21.0 pyhd8ed1ab_0 conda-forge
pamela 1.0.0 py_0 conda-forge
pandas 1.4.0 py39hde0f152_0 conda-forge
pandoc 2.14.1 h7f98852_0 conda-forge
pandocfilters 1.4.2 py_1 conda-forge
parquet-cpp 1.5.1 1 conda-forge
parso 0.8.2 pyhd8ed1ab_0 conda-forge
partd 1.2.0 pyhd8ed1ab_0 conda-forge
pcre 8.45 h9c3ff4c_0 conda-forge
pexpect 4.8.0 pyh9f0ad1d_2 conda-forge
pickleshare 0.7.5 py_1003 conda-forge
pillow 8.4.0 py39ha612740_0 conda-forge
pip 21.2.4 pyhd8ed1ab_0 conda-forge
pluggy 1.0.0 py39hf3d152e_2 conda-forge
prometheus_client 0.11.0 pyhd8ed1ab_0 conda-forge
prompt-toolkit 3.0.19 pyha770c72_0 conda-forge
psutil 5.9.0 py39h3811e60_0 conda-forge
pthread-stubs 0.4 h36c2ea0_1001 conda-forge
ptyprocess 0.7.0 pyhd3deb0d_0 conda-forge
py 1.11.0 pyh6c4a22f_0 conda-forge
pyarrow 6.0.1 py39hff6fa39_8_cpu conda-forge
pyasn1 0.4.8 py_0 conda-forge
pyasn1-modules 0.2.7 py_0 conda-forge
pycosat 0.6.3 py39h3811e60_1006 conda-forge
pycparser 2.20 pyh9f0ad1d_2 conda-forge
pycurl 7.44.1 py39h72e3413_0 conda-forge
pyerfa 2.0.0.1 py39hce5d2b2_1 conda-forge
pygments 2.10.0 pyhd8ed1ab_0 conda-forge
pyjwt 2.1.0 pyhd8ed1ab_0 conda-forge
pyopenssl 20.0.1 pyhd8ed1ab_0 conda-forge
pyparsing 2.4.7 pyh9f0ad1d_0 conda-forge
pyqt 5.12.3 py39hf3d152e_8 conda-forge
pyqt-impl 5.12.3 py39hde8b62d_8 conda-forge
pyqt5-sip 4.19.18 py39he80948d_8 conda-forge
pyqtchart 5.12 py39h0fcd23e_8 conda-forge
pyqtwebengine 5.12.1 py39h0fcd23e_8 conda-forge
pyrsistent 0.17.3 py39h3811e60_2 conda-forge
pysocks 1.7.1 py39hf3d152e_3 conda-forge
pytables 3.7.0 py39h2669a42_0 conda-forge
pytest 6.2.5 py39hf3d152e_2 conda-forge
pytest-runner 5.3.1 pyhd8ed1ab_0 conda-forge
python 3.9.6 h49503c6_1_cpython conda-forge
python-dateutil 2.8.2 pyhd8ed1ab_0 conda-forge
python-editor 1.0.4 py_0 conda-forge
python-json-logger 2.0.1 pyh9f0ad1d_0 conda-forge
python-kubernetes 21.7.0 pyhd8ed1ab_0 conda-forge
python_abi 3.9 2_cp39 conda-forge
pytz 2021.1 pyhd8ed1ab_0 conda-forge
pyu2f 0.1.5 pyhd8ed1ab_0 conda-forge
pyyaml 6.0 py39h3811e60_3 conda-forge
pyzmq 22.2.1 py39h37b5a0c_0 conda-forge
qt 5.12.9 hda022c4_4 conda-forge
re2 2021.11.01 h9c3ff4c_0 conda-forge
readline 8.1 h46c0cb4_0 conda-forge
reproc 14.2.1 h36c2ea0_0 conda-forge
reproc-cpp 14.2.1 h58526e2_0 conda-forge
requests 2.26.0 pyhd8ed1ab_0 conda-forge
requests-oauthlib 1.3.0 pyh9f0ad1d_0 conda-forge
requests-unixsocket 0.2.0 py_0 conda-forge
rsa 4.8 pyhd8ed1ab_0 conda-forge
ruamel.yaml 0.17.13 py39h3811e60_0 conda-forge
ruamel.yaml.clib 0.2.2 py39h3811e60_2 conda-forge
ruamel_yaml 0.15.80 py39h3811e60_1004 conda-forge
s2n 1.0.10 h9b69904_0 conda-forge
scipy 1.7.3 py39hee8e79c_0 conda-forge
send2trash 1.8.0 pyhd8ed1ab_0 conda-forge
setuptools 57.4.0 py39hf3d152e_0 conda-forge
simpervisor 0.4 pyhd8ed1ab_0 conda-forge
six 1.16.0 pyh6c4a22f_0 conda-forge
snappy 1.1.8 he1b5a44_3 conda-forge
sniffio 1.2.0 py39hf3d152e_1 conda-forge
sortedcontainers 2.4.0 pyhd8ed1ab_0 conda-forge
sqlalchemy 1.4.23 py39h3811e60_0 conda-forge
sqlite 3.36.0 h9cd32fc_0 conda-forge
tblib 1.7.0 pyhd8ed1ab_0 conda-forge
terminado 0.11.1 py39hf3d152e_0 conda-forge
testpath 0.5.0 pyhd8ed1ab_0 conda-forge
tk 8.6.11 h21135ba_0 conda-forge
toml 0.10.2 pyhd8ed1ab_0 conda-forge
toolz 0.11.2 pyhd8ed1ab_0 conda-forge
tornado 6.1 py39h3811e60_1 conda-forge
tqdm 4.62.2 pyhd8ed1ab_0 conda-forge
traitlets 5.0.5 py_0 conda-forge
typing-extensions 4.0.1 hd8ed1ab_0 conda-forge
typing_extensions 4.0.1 pyha770c72_0 conda-forge
tzdata 2021a he74cb21_1 conda-forge
unicodedata2 14.0.0 py39h3811e60_0 conda-forge
urllib3 1.26.6 pyhd8ed1ab_0 conda-forge
wcwidth 0.2.5 pyh9f0ad1d_2 conda-forge
webencodings 0.5.1 py_1 conda-forge
websocket-client 0.57.0 py39hf3d152e_4 conda-forge
websockify 0.10.0 py39h3811e60_1 conda-forge
wheel 0.37.0 pyhd8ed1ab_1 conda-forge
xorg-libxau 1.0.9 h7f98852_0 conda-forge
xorg-libxdmcp 1.1.3 h7f98852_0 conda-forge
xz 5.2.5 h516909a_1 conda-forge
yaml 0.2.5 h516909a_0 conda-forge
yarl 1.7.2 py39h3811e60_1 conda-forge
zeromq 4.3.4 h9c3ff4c_0 conda-forge
zict 2.0.0 py_0 conda-forge
zipp 3.5.0 pyhd8ed1ab_0 conda-forge
zlib 1.2.11 h36c2ea0_1013 conda-forge`