Merge pull request #77 from NIEHS/site-update

citation and readme updates

Author: kyle-messier

README.Rmd

@@ -25,7 +25,9 @@ knitr::opts_chunk$set(
 
 <!-- badges: end -->
 
-`GeoTox` open-source R software package for characterizing the risk of perturbing molecular targets involved in adverse human health outcomes based on exposure to spatially-referenced stressor mixtures via the GeoTox framework - otherwise known as source-to-outcome-continuum modeling. The package, methods, and case-studies are described in [Messier, Reif, and Marvel, 2024, medRxiv-Preprint](https://www.medrxiv.org/content/10.1101/2024.09.23.24314096).
+
+`GeoTox` open-source R software package for characterizing the risk of perturbing molecular targets involved in adverse human health outcomes based on exposure to spatially-referenced stressor mixtures via the GeoTox framework - otherwise known as source-to-outcome-continuum modeling. The package, methods, and case-studies are described in [Messier, Reif, and Marvel, 2025, Human Genomics](https://doi.org/10.1186/s40246-024-00711-8).
+
 
 The GeoTox framework was first described in
 [Eccles et al. A geospatial modeling approach to quantifying the risk of exposure to environmental chemical mixtures via a common molecular target. Sci Total Environ. 2023 Jan 10;855:158905.](https://pubmed.ncbi.nlm.nih.gov/36152849/)

README.md

@@ -21,8 +21,9 @@ perturbing molecular targets involved in adverse human health outcomes
 based on exposure to spatially-referenced stressor mixtures via the
 GeoTox framework - otherwise known as source-to-outcome-continuum
 modeling. The package, methods, and case-studies are described in
-[Messier, Reif, and Marvel, 2024,
-medRxiv-Preprint](https://www.medrxiv.org/content/10.1101/2024.09.23.24314096).
+[Messier, Reif, and Marvel, 2025, Human
+Genomics](https://doi.org/10.1186/s40246-024-00711-8).
+
 
 The GeoTox framework was first described in [Eccles et al. A geospatial
 modeling approach to quantifying the risk of exposure to environmental

inst/CITATION

@@ -1,17 +1,23 @@
 citHeader("To cite package GeoTox in publications, please use:")
 
 bibentry(
-  bibtype = "article",
-  author = c("Messier, Kyle P", "Reif, David M", "Marvel, Skylar W"),
-  title = "The GeoTox Package: Open-source software for connecting spatiotemporal exposure to individual and population-level risk",
-  journal = "medRxiv",
-  year = "2024",
-  doi = "10.1101/2024.09.23.24314096",
-  elocationid = "2024.09.23.24314096",
-  url = "https://www.medrxiv.org/content/10.1101/2024.09.23.24314096v1",
-  eprint = "https://www.medrxiv.org/content/10.1101/2024.09.23.24314096v1.full.pdf"
+  bibtype = "Article",
+  author = c(
+    person("Kyle P.", "Messier"),
+    person("David M.", "Reif"),
+    person("Skylar W.", "Marvel")
+  ),
+  title = "The GeoTox Package: open-source software for connecting spatiotemporal exposure to individual and population-level risk",
+  journal = "Human Genomics",
+  year = 2025,
+  volume = 19,
+  number = 1,
+  pages = "5",
+  doi = "10.1186/s40246-024-00711-8",
+  url = "https://doi.org/10.1186/s40246-024-00711-8"
 )
 
+
 bibentry(
   bibtype = "article",
   author = c(