Question Regarding CELEBRIMBOR Results: All Proteins Classified as "Rare" #10
Description
Dear Team
I have run CELEBRIMBOR in "mmseqs2" mode. The analysis classified all my proteins as "rare" and did not identify any core genes.
This leads me to wonder if the issue lies within the nature of my bins or if CELEBRIMBOR has limitations when processing highly divergent bins (MAGs).
I would appreciate any guidance on potential adjustments or recommendations for analyzing this type of data.
Best regards,
Benjamin Leyton