EPI-2021/_output.yml at main · cbw-dev/EPI-2021 · GitHub

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bookdown::gitbook:
  css: style.css # This is how bookdown knows to look at style.css for formatting
  pandoc_args:
    - "--lua-filter=callouts.lua"
  includes:
    in_header:
      - fa-header.html
      - _bioschemas.html
  config:
    sharing:
      facebook: no
      twitter: no
    toc: # Table of Contents
      collapse: subsection
      before: |
        <a href="https://bioinformaticsdotca.github.io/">
         <img src="img/bioinformatics_logo.png" width="90%" alt="bioinformatics.ca logo" style="display:block; margin-left:auto; margin-right:auto; margin-top:15px;">
         </a>
        <li><center><strong><a href="./"><br>Epigenomic Analysis<br><br></a></strong></center></li>
        <a href="./">
         <img src="img/CBW_Epigenome-data_icon.png" width="70%" alt="Epigenomic Analysis logo" style="display:block; margin-left:auto; margin-right:auto; ">
         </a>
        <br>

      after: |
        <h1 id="sponsors">Sponsors</h1>
        <center>
        <a href="https://www.cihr-irsc.gc.ca"><img src="img/sponsors/cihr.png" width=90% style="padding-bottom: 20px" alt="Canadian Institutes of Health Research logo."></a>

        <a href="https://genomecanada.ca/"><img src="img/sponsors/genomecanada.png" height="55" style="display:inline-block;"  style="padding-bottom: 20px" alt="Genome Canada logo.">
        <a href="https://www.ontariogenomics.ca/"><img src="img/sponsors/ontariogenomics.png" height="55" style="display:inline-block;" style="padding-bottom: 20px;" alt="Ontario Genomics logo.">
        <br><br>
        <a href="https://oicr.on.ca/"><img src="img/sponsors/oicr.png" width=35% style="display:inline-block;" style="padding-bottom: 20px" alt="Ontario Institute for Cancer Research logo.">


    edit: https://github.com/bioinformaticsdotca/EPI_2021/blob/main/%s

    download: ["pdf", "epub"]
  number_sections: false
bookdown::pdf_book:
  includes:
    in_header: preamble.tex
  latex_engine: xelatex
  citation_package: natbib
  keep_tex: yes
bookdown::epub_book: default
bookdown::html_document2:
  css: style.css
  pandoc_args:
    - "--lua-filter=callouts.lua"
  includes:
    in_header:
      - fa-header.html