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Move Virco report into MiCall pipeline #411

@donkirkby

Description

@donkirkby

Convert the Virco scoring algorithm to use the Stanford ASI rules format, and place it under internal source control.

The current algorithm is implemented here:

  • fdrive/RESIST/ruby/ckwlib/virco_algorithm.rb

The driver script is fdrive/RESIST/MISEQ/miseq_gen_results.rb.

  • convert rules
  • compare results to Ruby version
  • move key coverage positions into scoring algorithm (separate issue?)

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