diff --git a/mkdocs.yml b/mkdocs.yml
index 151d0edaf..e909a9117 100644
--- a/mkdocs.yml
+++ b/mkdocs.yml
@@ -58,8 +58,10 @@ extra_javascript:
- javascripts/config.js
- https://cdnjs.cloudflare.com/polyfill/v3/polyfill.min.js
- javascripts/tables.js
- - https://cdnjs.cloudflare.com/ajax/libs/tablesort/5.2.1/tablesort.min.js
+ - https://cdn.jsdelivr.net/npm/tablesort@5/src/tablesort.min.js
+ - https://cdn.jsdelivr.net/npm/d3@7/dist/d3.min.js
- javascripts/katex.js
- https://cdn.jsdelivr.net/npm/katex@0.16/dist/katex.min.js
- https://cdn.jsdelivr.net/npm/katex@0.16/dist/contrib/mhchem.min.js
- https://cdn.jsdelivr.net/npm/katex@0.16/dist/contrib/auto-render.min.js
+ - https://cdn.plot.ly/plotly-3.1.0.min.js
diff --git a/pages/cv/index.md b/pages/cv/index.md
index 81b14ae14..37903450f 100644
--- a/pages/cv/index.md
+++ b/pages/cv/index.md
@@ -21,6 +21,9 @@ as in **[Ionic Liquids](ionic_liquid.md)**, or it consists of a non-conductive s
* **COOR**: CO Oxidation Reaction, usually studied in a CO saturated electrolyte.
* **HER**: Hydrogen Evolution Reaction.
+## Individual Comparisons
+**[Compare](compare.md)**
+
[^1]:
Note that in the literature the abbreviation CV is sometimes
used for the technique cyclic voltammetry.
diff --git a/pixi.lock b/pixi.lock
index f600dd0b9..5f920bcba 100644
--- a/pixi.lock
+++ b/pixi.lock
@@ -198,6 +198,7 @@ environments:
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- conda: https://conda.anaconda.org/conda-forge/noarch/myst-parser-4.0.1-pyhd8ed1ab_0.conda
+ - conda: https://conda.anaconda.org/conda-forge/noarch/narwhals-2.2.0-pyhcf101f3_0.conda
- conda: https://conda.anaconda.org/conda-forge/noarch/nbclient-0.10.2-pyhd8ed1ab_0.conda
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- conda: https://conda.anaconda.org/conda-forge/linux-64/ncurses-6.5-h2d0b736_3.conda
@@ -218,7 +219,7 @@ environments:
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- - conda: https://conda.anaconda.org/conda-forge/noarch/plotly-5.24.1-pyhd8ed1ab_1.conda
+ - conda: https://conda.anaconda.org/conda-forge/noarch/plotly-6.3.0-pyhd8ed1ab_0.conda
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@@ -286,7 +287,6 @@ environments:
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- conda: https://conda.anaconda.org/conda-forge/noarch/tabulate-0.9.0-pyhd8ed1ab_2.conda
- - conda: https://conda.anaconda.org/conda-forge/noarch/tenacity-9.1.2-pyhd8ed1ab_0.conda
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- conda: https://conda.anaconda.org/conda-forge/noarch/tomli-2.2.1-pyhe01879c_2.conda
@@ -303,7 +303,7 @@ environments:
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- - conda: https://conda.anaconda.org/conda-forge/linux-64/unicodedata2-16.0.0-py312h66e93f0_0.conda
+ - conda: https://conda.anaconda.org/conda-forge/linux-64/unicodedata2-16.0.0-py312h4c3975b_1.conda
- conda: https://conda.anaconda.org/conda-forge/noarch/unitpackage-0.10.1-pyhd8ed1ab_0.conda
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- conda: https://conda.anaconda.org/conda-forge/noarch/validators-0.35.0-pyhd8ed1ab_0.conda
@@ -344,15 +344,15 @@ environments:
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- - conda: https://conda.anaconda.org/conda-forge/osx-64/aiohttp-3.12.15-py313h4db2fa4_0.conda
+ - conda: https://conda.anaconda.org/conda-forge/osx-64/aiohttp-3.12.15-py312h3d55d04_0.conda
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- - conda: https://conda.anaconda.org/conda-forge/osx-64/astroid-3.3.11-py313habf4b1d_0.conda
+ - conda: https://conda.anaconda.org/conda-forge/osx-64/astroid-3.3.11-py312hb401068_0.conda
- conda: https://conda.anaconda.org/conda-forge/noarch/astropy-7.1.0-pyhd8ed1ab_0.conda
- - conda: https://conda.anaconda.org/conda-forge/osx-64/astropy-base-7.1.0-py313hc310da9_0.conda
+ - conda: https://conda.anaconda.org/conda-forge/osx-64/astropy-base-7.1.0-py312ha1a7de2_0.conda
- conda: https://conda.anaconda.org/conda-forge/noarch/astropy-iers-data-0.2025.8.25.0.36.58-pyhd8ed1ab_0.conda
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- conda: https://conda.anaconda.org/conda-forge/noarch/attrs-25.3.0-pyh71513ae_0.conda
@@ -376,50 +376,50 @@ environments:
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- conda: https://conda.anaconda.org/conda-forge/noarch/beautifulsoup4-4.13.5-pyha770c72_0.conda
- - conda: https://conda.anaconda.org/conda-forge/noarch/black-25.1.0-pyh866005b_0.conda
+ - conda: https://conda.anaconda.org/conda-forge/osx-64/black-25.1.0-py312hb401068_0.conda
- conda: https://conda.anaconda.org/conda-forge/noarch/bleach-6.2.0-pyh29332c3_4.conda
- conda: https://conda.anaconda.org/conda-forge/noarch/botocore-1.39.11-pyge310_1234567_0.conda
- - conda: https://conda.anaconda.org/conda-forge/osx-64/bottleneck-1.5.0-py313h1492807_0.conda
+ - conda: https://conda.anaconda.org/conda-forge/osx-64/bottleneck-1.5.0-py312h025c719_0.conda
- conda: https://conda.anaconda.org/conda-forge/noarch/bqplot-0.12.43-pyhd8ed1ab_1.conda
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- conda: https://conda.anaconda.org/conda-forge/osx-64/brotli-bin-1.1.0-h6e16a3a_3.conda
- - conda: https://conda.anaconda.org/conda-forge/osx-64/brotli-python-1.1.0-py313h14b76d3_3.conda
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license: LGPL-2.1-or-later
license_family: LGPL
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license: BSD-2-Clause
license_family: BSD
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license: MIT
license_family: MIT
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license: MIT
license_family: MIT
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license_family: BSD
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license: MIT
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license: MIT
license_family: MIT
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license: Apache-2.0
license_family: APACHE
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license_family: Apache
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- md5: 484fad6d5e455d642d18c331444b3f8c
+- conda: https://conda.anaconda.org/conda-forge/osx-64/yarl-1.20.1-py312h3520af0_0.conda
+ sha256: 91011952c0e020ab56c012d9f7bfc245c348e9bf1669c30cc523736c8ec4fddd
+ md5: 889fa353589442fb6eef00ae03285cae
depends:
- __osx >=10.13
- idna >=2.0
- multidict >=4.0
- propcache >=0.2.1
- - python >=3.13,<3.14.0a0
- - python_abi 3.13.* *_cp313
+ - python >=3.12,<3.13.0a0
+ - python_abi 3.12.* *_cp312
license: Apache-2.0
license_family: Apache
purls:
- pkg:pypi/yarl?source=hash-mapping
- size: 144490
- timestamp: 1749555095769
+ size: 143930
+ timestamp: 1749555082258
- conda: https://conda.anaconda.org/conda-forge/win-64/yarl-1.20.1-py313hb4c8b1a_0.conda
sha256: c7173defe45cb7863d2c5a415a2a16b4afc9e0f6d4ac7b61879e24b095b01f64
md5: 288f95c67d49237abbaab05d2f0ef9dd
@@ -9587,20 +9607,20 @@ packages:
- pkg:pypi/zstandard?source=hash-mapping
size: 488806
timestamp: 1756075707087
-- conda: https://conda.anaconda.org/conda-forge/osx-64/zstandard-0.23.0-py313h585f44e_3.conda
- sha256: e747c88492fea02af89ecfd0c861dfce9e4dae2cc7654b1b47149e28020dcaa6
- md5: f18c1c08e948da397136badfa69ad82d
+- conda: https://conda.anaconda.org/conda-forge/osx-64/zstandard-0.23.0-py312h2f459f6_3.conda
+ sha256: ae6a6f87f27270d3c58c826ba3e344780816793af7586fe7f3fa4d4b07c9e274
+ md5: f53fa375c2e4a2e42a64578db302145d
depends:
- __osx >=10.13
- cffi >=1.11
- - python >=3.13,<3.14.0a0
- - python_abi 3.13.* *_cp313
+ - python >=3.12,<3.13.0a0
+ - python_abi 3.12.* *_cp312
license: BSD-3-Clause
license_family: BSD
purls:
- pkg:pypi/zstandard?source=hash-mapping
- size: 648827
- timestamp: 1756075802303
+ size: 644204
+ timestamp: 1756075773049
- conda: https://conda.anaconda.org/conda-forge/win-64/zstandard-0.23.0-py313h5ea7bf4_3.conda
sha256: fd446ae9142ddcaf123de7997dbded7aee88c333ab4dfd7bf3cfca4c2041aca1
md5: 884170f85de370eb45d5c4edab147861
diff --git a/pyproject.toml b/pyproject.toml
index 6dc29f19e..f6e392e0b 100644
--- a/pyproject.toml
+++ b/pyproject.toml
@@ -31,7 +31,7 @@ mkdocs = "*"
myst-nb = "*"
myst-parser = "*"
pip = "*"
-plotly = ">=5,<6" # Workaround for https://github.com/executablebooks/MyST-NB/issues/667
+plotly = "*"
pylatexenc = "*"
pylint = "*"
pytest = "*"
diff --git a/templates/components/cv_compare_table.md b/templates/components/cv_compare_table.md
new file mode 100644
index 000000000..c554bbac3
--- /dev/null
+++ b/templates/components/cv_compare_table.md
@@ -0,0 +1,5 @@
+| Selected | | Substrate | Electrolyte {: .echemdb-expand-column } | Year {: .echemdb-hide-mobile } | Reference {: .echemdb-hide-mobile } |
+| -------- | ----- | --------- | ----------- | ---- | --------- |
+{% for entry in database %}
+| {{entry.identifier}} | [ | b64encode }}){: .echemdb-cv-thumbnail }](entries/{{ entry.identifier }}.md) {: .echemdb-middle-cell } | {{ material }}({{ entry.get_electrode('WE').crystallographicOrientation }}) {: .echemdb-middle-cell } | {{ entry.system.electrolyte | render("components/electrolyte.md") }} {: .echemdb-middle-cell } | {{ database.bibliography.entries[entry.source.citationKey].fields['year'] }} {: .echemdb-hide-mobile .echemdb-middle-cell } | [ {{ entry.bibliography.persons['author'][0].last_names[0] | unicode }} ***et. al.*** Fig. {{ entry.source.figure }} ({{ entry.source.curve }})]({{ entry.source.url }}) {: .echemdb-hide-mobile .echemdb-middle-cell } |
+{% endfor %}
diff --git a/templates/pages/compare.md b/templates/pages/compare.md
new file mode 100644
index 000000000..919a96b15
--- /dev/null
+++ b/templates/pages/compare.md
@@ -0,0 +1,161 @@
+# Cyclic Voltammograms
+{{ intro }}
+
+Click a graph to add it to the comparison.
+
+
+
+
+
+{{ render("components/cv_compare_table.md", entries_path=entries_path, database=database) }}
+
+
+
+
+
+
+
+
diff --git a/website/filters/render.py b/website/filters/render.py
index 0cbabd057..769400857 100644
--- a/website/filters/render.py
+++ b/website/filters/render.py
@@ -148,5 +148,8 @@ def render_plot(entry):
fig.update_yaxes(
showline=True, mirror=True, range=(y_min - y_padding, y_max + y_padding)
)
-
- return fig._repr_html_() # pylint: disable=W0212
+ return fig.to_html(
+ full_html=False,
+ include_plotlyjs="https://cdn.plot.ly/plotly-3.1.0.min.js",
+ include_mathjax=False,
+ )
diff --git a/website/generator/__main__.py b/website/generator/__main__.py
index aa5e81244..2ad9e51f6 100644
--- a/website/generator/__main__.py
+++ b/website/generator/__main__.py
@@ -77,6 +77,18 @@ def main():
)
t_aqueous = time.time() - t_aqueous_start
print(f"Generated aqueous overview page in {t_aqueous:.2f} seconds")
+
+ # Create an overview page with tabulated and linked entries for all systems to compare.
+ with mkdocs_gen_files.open(os.path.join("cv", "compare.md"), "w") as markdown:
+ markdown.write(
+ render(
+ "pages/compare.md",
+ database=database,
+ intro="Cyclic voltammograms to compare.",
+ material_filter=material_filter(),
+ )
+ )
+
t_coor_start = time.time()
# Create an overview page with tabulated and linked entries for CO oxidation (COOR) in aqueous systems.
with mkdocs_gen_files.open(
@@ -110,6 +122,7 @@ def main():
material_filter=material_filter(),
)
)
+
t_ionic_liquid = time.time() - t_ionic_liquid_start
print(f"Generated ionic liquid overview page in {t_ionic_liquid:.2f} seconds")
diff --git a/website/generator/database.py b/website/generator/database.py
index 1f3d4f0e5..ca43c6e10 100644
--- a/website/generator/database.py
+++ b/website/generator/database.py
@@ -37,11 +37,15 @@
# ********************************************************************
import os
+from mkdocs.config import load_config
from unitpackage.database.echemdb import Echemdb
+config = load_config("mkdocs.yml")
+
ECHEMDB_DATABASE_URL = os.environ.get(
"ECHEMDB_DATABASE_URL",
"https://github.com/echemdb/electrochemistry-data/releases/download/0.5.1/data-0.5.1.zip",
)
cv = Echemdb.from_remote(url=ECHEMDB_DATABASE_URL)
+cv.save_entries(outdir=os.path.join(config["site_dir"], "data"))