findPaths: argument 1 is not a vector

[araksm]

HI,

I'm trying to find paths for my custom_clusters, that are added to the cellrouter@sampTab:

cellrouter <- findPaths(cellrouter, column='custom_clusters', libdir, paste(getwd(), 'results/paths', sep='/'), method="graph")

and it generates an error:

Error in order(tmp2$value, decreasing = TRUE) :
argument 1 is not a vector

How could I resolve the issue?

Thank you,
Araks

[edroaldo]

Sorry for my delayed response. Can you please provide me some more code to better track your issue? Did you successfully generated the plot from the plotKNN function? I suspect the cell_edge_weighted_network.txt might somehow be empty. Thanks!

…

On Wed, May 8, 2019 at 5:56 AM Araks Martirosyan ***@***.***> wrote: HI, I'm trying to find paths for my custom_clusters, that are added to the ***@***.***: cellrouter <- findPaths(cellrouter, column='custom_clusters, libdir, paste(getwd(), 'results/paths', sep='/'), method="graph") and it generates an error: Error in order(tmp2$value, decreasing = TRUE) : argument 1 is not a vector How could I resolve the issue? Thank you, Araks — You are receiving this because you are subscribed to this thread. Reply to this email directly, view it on GitHub <#24>, or mute the thread <https://github.com/notifications/unsubscribe-auth/ACNJIR7RT4L3VCV3VADV5BTPUKPTNANCNFSM4HLQFZUA> .

-- Edroaldo