could not find function "graph.data.frame" when running buildGRN on example code

[AndreaRP]

Hi,

I've been trying to run your example code but I get the following error when I get to running "buildGRN":
Error in graph.data.frame(tmpAns, directed = directed, v = verticies) : could not find function "graph.data.frame"
I had no trouble installing any dependencies either, so I don't understand where the problem could be, any insight would be appreciated.
Session info:
R version 4.0.3 (2020-10-10)
Platform: x86_64-pc-linux-gnu (64-bit)
Running under: Ubuntu 18.04.6 LTS, RStudio 1.3.959

[edroaldo]

Hi Andrea, Can you please try loading igraph before calling buildGRN: library(igraph) Thanks!

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On Tue, 22 Feb 2022 at 06:46, Andrea ***@***.***> wrote: Hi, I've been trying to run your example code but I get the following error when I get to running "buildGRN": Error in graph.data.frame(tmpAns, directed = directed, v = verticies) : could not find function "graph.data.frame" I had no trouble installing any dependencies either, so I don't understand where the problem could be, any insight would be appreciated. Session info: R version 4.0.3 (2020-10-10) Platform: x86_64-pc-linux-gnu (64-bit) Running under: Ubuntu 18.04.6 LTS, RStudio 1.3.959 — Reply to this email directly, view it on GitHub <#32>, or unsubscribe <https://github.com/notifications/unsubscribe-auth/ACNJIR3IDCG3Y2AHX3CPEADU4NZSPANCNFSM5PBESKWA> . Triage notifications on the go with GitHub Mobile for iOS <https://apps.apple.com/app/apple-store/id1477376905?ct=notification-email&mt=8&pt=524675> or Android <https://play.google.com/store/apps/details?id=com.github.android&referrer=utm_campaign%3Dnotification-email%26utm_medium%3Demail%26utm_source%3Dgithub>. You are receiving this because you are subscribed to this thread.Message ID: ***@***.***>

[AndreaRP]

That solved the issue, thanks a lot!

[edroaldo]

Great! Thanks for using CellRouter!

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On Tue, 22 Feb 2022 at 11:20, Andrea ***@***.***> wrote: That solved the issue, thanks a lot! — Reply to this email directly, view it on GitHub <#32 (comment)>, or unsubscribe <https://github.com/notifications/unsubscribe-auth/ACNJIR4XTQHJKWNASYYJOT3U4OZUXANCNFSM5PBESKWA> . Triage notifications on the go with GitHub Mobile for iOS <https://apps.apple.com/app/apple-store/id1477376905?ct=notification-email&mt=8&pt=524675> or Android <https://play.google.com/store/apps/details?id=com.github.android&referrer=utm_campaign%3Dnotification-email%26utm_medium%3Demail%26utm_source%3Dgithub>. You are receiving this because you commented.Message ID: ***@***.***>