diff --git a/niaaml_gui/windows/threads/pipeline_runner_thread.py b/niaaml_gui/windows/threads/pipeline_runner_thread.py
index 78c07ae..b6121c8 100644
--- a/niaaml_gui/windows/threads/pipeline_runner_thread.py
+++ b/niaaml_gui/windows/threads/pipeline_runner_thread.py
@@ -39,7 +39,7 @@ def run(self):
             }
 
             process = subprocess.Popen(
-                ["python", "niaaml_gui/utils/run_pipeline_subprocess.py"],
+                ["python", "-m", "niaaml_gui.utils.run_pipeline_subprocess"],
                 stdin=subprocess.PIPE,
                 stdout=subprocess.PIPE,
                 stderr=subprocess.STDOUT,