Could provide some example file format?

[ryuzheng]

Hello, Can you provide example file of meta data?
And how to create the hg38_genecode_v28.geneslop2k.bed.gz, promoter_slop2k.sorted.bed.gz, hg38_CGI.sorted.bed.gz files? Does slop represent adding 2000bp before and after the region? Thank you.

[kenrchandradoss]

I second that.

Also, if you could add URL here (https://lhqing.github.io/ALLCools/cell_level/basic/intro_basic_clustering.html), that would be awesome. Thank you :)

[williamthistle]

Hi! I also would like to know more about the hg38_genecode_v28.geneslop2k.bed.gz file. I tried Googling around but didn't find any information.

[ophrys97]

It would be greatly appreciated if you could add the data download link required in the sample document. I noticed that the link at the "Download Input Files" section on the webpage still shows "ADD DOWNLOAD URL".（ https://lhqing.github.io/ALLCools/cell_level/basic/intro_basic_clustering.html ）