Hello,
First, thank you for developing the tool!
My question is if I can identify fusions between switch regions of 2 different types of IGH genes due to class-switching recombination. From my understanding, those regions are not included within the ensemble database and have no Ensembl ID.
Would it be feasible to consider fusions within these regions using the fusioncatcher?
Thank you!
Kind regards,
Agshin