Input to segmentCNV2.R which uses CGHcall.

Hi,

I too wonder what input is used by absCNSeq.  I used copy number calls from varscan2 as input to DNAcopy, generated smoothed segments and merged them.  You mentioned segment2CNV2.R is the input in Issue #1 . What is the input for segment2CNV2.R?  Rather, what are the steps I need to follow to correctly feed data to absCNSeq?

Thanks.
