diff --git a/.gitignore b/.gitignore
index 07377ae..e66a8b6 100644
--- a/.gitignore
+++ b/.gitignore
@@ -1,3 +1,6 @@
+# Ignore vscode settings
+.vscode/
+
 # Ignore example dataset storage generated in tutorial
 **/pod_data/
 
diff --git a/.vscode/settings.json b/.vscode/settings.json
deleted file mode 100644
index fb3c2bc..0000000
--- a/.vscode/settings.json
+++ /dev/null
@@ -1,41 +0,0 @@
-{
-    "editor.formatOnPaste": false,
-    "editor.formatOnSave": true,
-    "notebook.formatOnSave.enabled": true,
-    "notebook.output.scrolling": true,
-    "editor.rulers": [
-        88
-    ],
-    "[python]": {
-        "editor.defaultFormatter": "ms-python.black-formatter"
-    },
-    "[markdown]": {
-        "editor.defaultFormatter": null
-    },
-    "workbench.editorAssociations": {
-        "*.md": "vscode.markdown.preview.editor"
-    },
-    "files.autoSave": "off",
-    "jupyter.kernels.excludePythonEnvironments": [
-        "/bin/python3",
-        "/usr/bin/python3",
-        "/usr/local/bin/python"
-    ],
-    "python.defaultInterpreterPath": "/home/vscode/.local/share/base/bin/python",
-    "python.terminal.activateEnvironment": false,
-    "gitlens.showWelcomeOnInstall": false,
-    "gitlens.showWhatsNewAfterUpgrades": false,
-    "launch": {
-        "version": "0.2.0",
-        "configurations": [
-            {
-                "name": "Python",
-                "type": "debugpy",
-                "request": "launch",
-                "console": "integratedTerminal",
-                "justMyCode": false,
-                "program": "${file}",
-            }
-        ]
-    },
-}
\ No newline at end of file
diff --git a/pyproject.toml b/pyproject.toml
index 3161f18..c640ca9 100644
--- a/pyproject.toml
+++ b/pyproject.toml
@@ -34,3 +34,6 @@ where = ["src"]
 
 [tool.setuptools_scm]
 version_file = "src/orcabridge/_version.py"
+
+[dependency-groups]
+dev = ["ruff>=0.11.11"]
diff --git a/src/orcabridge/__init__.py b/src/orcabridge/__init__.py
index 7a6f6c2..d58891e 100644
--- a/src/orcabridge/__init__.py
+++ b/src/orcabridge/__init__.py
@@ -1,4 +1,3 @@
-from .tracker import Tracker
 from . import hashing
 from . import pod
 from . import mapper
@@ -9,10 +8,11 @@
 from .pod import FunctionPod, function_pod
 from .source import GlobSource
 from .store import DirDataStore, SafeDirDataStore
+from .tracker import GraphTracker
 
 
 
-DEFAULT_TRACKER = Tracker()
+DEFAULT_TRACKER = GraphTracker()
 DEFAULT_TRACKER.activate()
 
 
diff --git a/src/orcabridge/dj/mapper.py b/src/orcabridge/dj/mapper.py
index 40a4237..1450f4e 100644
--- a/src/orcabridge/dj/mapper.py
+++ b/src/orcabridge/dj/mapper.py
@@ -3,7 +3,6 @@
 from ..mapper import Mapper, Join, MapPackets, MapTags
 from typing import Optional
 import warnings
-from .source import QuerySource
 
 
 class QueryMapper(QueryOperation, Mapper):
diff --git a/src/orcabridge/dj/tracker.py b/src/orcabridge/dj/tracker.py
index 1b89d24..8db180d 100644
--- a/src/orcabridge/dj/tracker.py
+++ b/src/orcabridge/dj/tracker.py
@@ -1,6 +1,6 @@
 from orcabridge.tracker import GraphTracker
 from datajoint import Schema
-from typing import List, Collection, Tuple, Optional, Any
+from typing import Collection, Tuple, Optional, Any
 from types import ModuleType
 import networkx as nx
 
@@ -13,7 +13,6 @@
 from .operation import QueryOperation
 from .pod import TableCachedPod
 from .mapper import convert_to_query_mapper
-import datajoint as dj
 import sys
 from collections import defaultdict
 
diff --git a/src/orcabridge/file.py b/src/orcabridge/file.py
index 6260f65..84b04e6 100644
--- a/src/orcabridge/file.py
+++ b/src/orcabridge/file.py
@@ -3,7 +3,7 @@
 import inspect
 import os
 from pathlib import Path
-from typing import Callable, Dict, Optional, Sequence, Tuple, Union
+from typing import Callable, Collection, Dict, Optional, Tuple, Union
 
 from orcabridge.types import Packet, PathSet
 
diff --git a/src/orcabridge/hashing/__init__.py b/src/orcabridge/hashing/__init__.py
index ebab3a9..1b5bac6 100644
--- a/src/orcabridge/hashing/__init__.py
+++ b/src/orcabridge/hashing/__init__.py
@@ -1,13 +1,14 @@
-from .hashing import (
+from .core import (
     hash_file,
     hash_pathset,
     hash_packet,
     hash_to_hex,
     hash_to_int,
     hash_to_uuid,
-    hash_function,
-    get_function_signature,
     HashableMixin,
+    function_content_hash,
+    get_function_signature,
+    hash_function
 )
 
 __all__ = [
@@ -19,5 +20,6 @@
     "hash_to_uuid",
     "hash_function",
     "get_function_signature",
+    "function_content_hash",
     "HashableMixin",
 ]
diff --git a/src/orcabridge/hashing/hashing.py b/src/orcabridge/hashing/core.py
similarity index 99%
rename from src/orcabridge/hashing/hashing.py
rename to src/orcabridge/hashing/core.py
index 2a97e14..71d1211 100644
--- a/src/orcabridge/hashing/hashing.py
+++ b/src/orcabridge/hashing/core.py
@@ -7,7 +7,6 @@
 """
 
 import hashlib
-import inspect
 import json
 import logging
 from uuid import UUID
@@ -18,10 +17,10 @@
     Union,
     Collection,
     Mapping,
-    Callable,
     TypeVar,
     Set,
-    Literal,
+    Callable,
+    Literal
 )
 from pathlib import Path
 from os import PathLike
@@ -29,6 +28,7 @@
 import zlib
 from orcabridge.types import PathSet, Packet
 from orcabridge.utils.name import find_noncolliding_name
+import inspect
 
 # Configure logging with __name__ for proper hierarchy
 logger = logging.getLogger(__name__)
@@ -310,7 +310,7 @@ def hash_to_hex(obj: Any, char_count: Optional[int] = 32) -> str:
             # Try standard JSON first
             json_str = json.dumps(processed, sort_keys=True).encode("utf-8")
             logger.info(
-                f"Successfully used standard JSON serialization as fallback"
+                "Successfully used standard JSON serialization as fallback"
             )
         except (TypeError, ValueError) as json_err:
             # If JSON also fails, use simple string representation
@@ -495,7 +495,7 @@ def _process_structure(obj: Any, visited: Optional[Set[int]] = None) -> Any:
         else:
             # Get basic repr but remove memory addresses
             logger.debug(
-                f"Object has no __dict__, using repr() with memory address removal"
+                "Object has no __dict__, using repr() with memory address removal"
             )
             obj_repr = repr(obj)
             if len(obj_repr) > 1000:
@@ -512,7 +512,7 @@ def _process_structure(obj: Any, visited: Optional[Set[int]] = None) -> Any:
         logger.warning(f"Failed to process object representation: {e}")
         try:
             return f"Object-{obj.__class__.__module__}.{obj.__class__.__name__}"
-        except:
+        except AttributeError:
             logger.error(
                 "Could not determine object class, using UnknownObject"
             )
@@ -522,6 +522,244 @@ def _process_structure(obj: Any, visited: Optional[Set[int]] = None) -> Any:
 # Function hashing utilities
 
 
+# Legacy compatibility functions
+
+
+def hash_dict(d: NestedDict) -> UUID:
+    """
+    Hash a dictionary with stable results across sessions.
+
+    Args:
+        d: The dictionary to hash (can be arbitrarily nested)
+
+    Returns:
+        A UUID hash of the dictionary
+    """
+    return hash_to_uuid(d)
+
+
+def stable_hash(s: Any) -> int:
+    """
+    Create a stable hash that returns the same integer value across sessions.
+
+    Args:
+        s: The object to hash
+
+    Returns:
+        An integer hash
+    """
+    return hash_to_int(s)
+
+
+# Hashing of packets and PathSet
+
+
+class PathSetHasher:
+    def __init__(self, char_count=32):
+        self.char_count = char_count
+
+    def hash_pathset(self, pathset: PathSet) -> str:
+        if isinstance(pathset, str) or isinstance(pathset, PathLike):
+            pathset = Path(pathset)
+            if not pathset.exists():
+                raise FileNotFoundError(f"Path {pathset} does not exist")
+            if pathset.is_dir():
+                # iterate over all entries in the directory include subdirectory (single step)
+                hash_dict = {}
+                for entry in pathset.iterdir():
+                    file_name = find_noncolliding_name(entry.name, hash_dict)
+                    hash_dict[file_name] = self.hash_pathset(entry)
+                return hash_to_hex(hash_dict, char_count=self.char_count)
+            else:
+                # it's a file, hash it directly
+                return hash_file(pathset)
+
+        if isinstance(pathset, Collection):
+            hash_dict = {}
+            for path in pathset:
+                file_name = find_noncolliding_name(Path(path).name, hash_dict)
+                hash_dict[file_name] = self.hash_pathset(path)
+            return hash_to_hex(hash_dict, char_count=self.char_count)
+
+        raise ValueError(f"PathSet of type {type(pathset)} is not supported")
+
+    def hash_file(self, filepath) -> str: ...
+
+    def id(self) -> str: ...
+
+
+def hash_packet_with_psh(
+    packet: Packet, algo: PathSetHasher, prefix_algorithm: bool = True
+) -> str:
+    """
+    Generate a hash for a packet based on its content.
+
+    Args:
+        packet: The packet to hash
+        algorithm: The algorithm to use for hashing
+        prefix_algorithm: Whether to prefix the hash with the algorithm name
+
+    Returns:
+        A hexadecimal digest of the packet's content
+    """
+    hash_results = {}
+    for key, pathset in packet.items():
+        hash_results[key] = algo.hash_pathset(pathset)
+
+    packet_hash = hash_to_hex(hash_results)
+
+    if prefix_algorithm:
+        # Prefix the hash with the algorithm name
+        packet_hash = f"{algo.id()}-{packet_hash}"
+
+    return packet_hash
+
+
+def hash_packet(
+    packet: Packet,
+    algorithm: str = "sha256",
+    buffer_size: int = 65536,
+    char_count: Optional[int] = 32,
+    prefix_algorithm: bool = True,
+) -> str:
+    """
+    Generate a hash for a packet based on its content.
+
+    Args:
+        packet: The packet to hash
+
+    Returns:
+        A hexadecimal digest of the packet's content
+    """
+    hash_results = {}
+    for key, pathset in packet.items():
+        hash_results[key] = hash_pathset(
+            pathset, algorithm=algorithm, buffer_size=buffer_size
+        )
+
+    packet_hash = hash_to_hex(hash_results, char_count=char_count)
+
+    if prefix_algorithm:
+        # Prefix the hash with the algorithm name
+        packet_hash = f"{algorithm}-{packet_hash}"
+
+    return packet_hash
+
+
+def hash_pathset(
+    pathset: PathSet,
+    algorithm="sha256",
+    buffer_size=65536,
+    char_count: Optional[int] = 32,
+) -> str:
+    """
+    Generate hash of the pathset based primarily on the content of the files.
+    If the pathset is a collection of files or a directory, the name of the file
+    will be included in the hash calculation.
+
+    Currently only support hashing of Pathset if Pathset points to a single file.
+    """
+    if isinstance(pathset, str) or isinstance(pathset, PathLike):
+        pathset = Path(pathset)
+        if not pathset.exists():
+            raise FileNotFoundError(f"Path {pathset} does not exist")
+        if pathset.is_dir():
+            # iterate over all entries in the directory include subdirectory (single step)
+            hash_dict = {}
+            for entry in pathset.iterdir():
+                file_name = find_noncolliding_name(entry.name, hash_dict)
+                hash_dict[file_name] = hash_pathset(
+                    entry,
+                    algorithm=algorithm,
+                    buffer_size=buffer_size,
+                    char_count=char_count,
+                )
+            return hash_to_hex(hash_dict, char_count=char_count)
+        else:
+            # it's a file, hash it directly
+            return hash_file(
+                pathset, algorithm=algorithm, buffer_size=buffer_size
+            )
+
+    if isinstance(pathset, Collection):
+        hash_dict = {}
+        for path in pathset:
+            file_name = find_noncolliding_name(Path(path).name, hash_dict)
+            hash_dict[file_name] = hash_pathset(
+                path,
+                algorithm=algorithm,
+                buffer_size=buffer_size,
+                char_count=char_count,
+            )
+        return hash_to_hex(hash_dict, char_count=char_count)
+
+
+def hash_file(file_path, algorithm="sha256", buffer_size=65536) -> str:
+    """
+    Calculate the hash of a file using the specified algorithm.
+
+    Parameters:
+        file_path (str): Path to the file to hash
+        algorithm (str): Hash algorithm to use - options include:
+                         'md5', 'sha1', 'sha256', 'sha512', 'xxh64', 'crc32', 'hash_path'
+        buffer_size (int): Size of chunks to read from the file at a time
+
+    Returns:
+        str: Hexadecimal digest of the hash
+    """
+    # Verify the file exists
+    if not Path(file_path).is_file():
+        raise FileNotFoundError(f"The file {file_path} does not exist")
+
+    # Handle special case for 'hash_path' algorithm
+    if algorithm == "hash_path":
+        # Hash the name of the file instead of its content
+        # This is useful for cases where the file content is well known or
+        # not relevant
+        return hash_to_hex(file_path)
+
+    # Handle non-cryptographic hash functions
+    if algorithm == "xxh64":
+        hasher = xxhash.xxh64()
+        with open(file_path, "rb") as file:
+            while True:
+                data = file.read(buffer_size)
+                if not data:
+                    break
+                hasher.update(data)
+        return hasher.hexdigest()
+
+    if algorithm == "crc32":
+        crc = 0
+        with open(file_path, "rb") as file:
+            while True:
+                data = file.read(buffer_size)
+                if not data:
+                    break
+                crc = zlib.crc32(data, crc)
+        return format(crc & 0xFFFFFFFF, "08x")  # Convert to hex string
+
+    # Handle cryptographic hash functions from hashlib
+    try:
+        hasher = hashlib.new(algorithm)
+    except ValueError:
+        valid_algorithms = ", ".join(sorted(hashlib.algorithms_available))
+        raise ValueError(
+            f"Invalid algorithm: {algorithm}. Available algorithms: {valid_algorithms}, xxh64, crc32"
+        )
+
+    with open(file_path, "rb") as file:
+        while True:
+            data = file.read(buffer_size)
+            if not data:
+                break
+            hasher.update(data)
+
+    return hasher.hexdigest()
+    return hasher.hexdigest()
+
+
+
 def get_function_signature(
     func: Callable, include_defaults: bool = True, include_module: bool = True
 ) -> str:
@@ -565,40 +803,19 @@ def get_function_signature(
     return " ".join(parts)
 
 
-def function_content_hash(
-    func: Callable,
-    include_name: bool = True,
-    include_module: bool = True,
-    include_declaration: bool = True,
-    char_count: Optional[int] = 32,
-) -> str:
-    """
-    Compute a stable hash based on a function's source code and other properties.
-
-    Args:
-        func: The function to hash
-        include_name: Whether to include the function name in the hash
-        include_module: Whether to include the module name in the hash
-        include_declaration: Whether to include the function declaration line
-        char_count: Number of characters to include in the result
-
-    Returns:
-        A hex string hash of the function's content
-    """
-    logger.debug(f"Generating content hash for function '{func.__name__}'")
-    components = get_function_components(
-        func,
-        include_name=include_name,
-        include_module=include_module,
-        include_declaration=include_declaration,
-    )
-
-    # Join all components and compute hash
-    combined = "\n".join(components)
-    logger.debug(
-        f"Function components joined, length: {len(combined)} characters"
-    )
-    return hash_to_hex(combined, char_count=char_count)
+def _is_in_string(line, pos):
+    """Helper to check if a position in a line is inside a string literal."""
+    # This is a simplified check - would need proper parsing for robust handling
+    in_single = False
+    in_double = False
+    for i in range(pos):
+        if line[i] == "'" and not in_double and (i == 0 or line[i - 1] != "\\"):
+            in_single = not in_single
+        elif (
+            line[i] == '"' and not in_single and (i == 0 or line[i - 1] != "\\")
+        ):
+            in_double = not in_double
+    return in_single or in_double
 
 
 def get_function_components(
@@ -680,14 +897,14 @@ def get_function_components(
 
         components.append(f"source:{source}")
 
-    except (IOError, TypeError) as e:
+    except (IOError, TypeError):
         # If source can't be retrieved, fall back to signature
         components.append(f"name:{func.__name__}")
         try:
             sig = inspect.signature(func)
             components.append(f"signature:{str(sig)}")
         except ValueError:
-            components.append(f"builtin:True")
+            components.append("builtin:True")
 
     # Add function annotations if requested
     if (
@@ -713,19 +930,40 @@ def get_function_components(
     return components
 
 
-def _is_in_string(line, pos):
-    """Helper to check if a position in a line is inside a string literal."""
-    # This is a simplified check - would need proper parsing for robust handling
-    in_single = False
-    in_double = False
-    for i in range(pos):
-        if line[i] == "'" and not in_double and (i == 0 or line[i - 1] != "\\"):
-            in_single = not in_single
-        elif (
-            line[i] == '"' and not in_single and (i == 0 or line[i - 1] != "\\")
-        ):
-            in_double = not in_double
-    return in_single or in_double
+def function_content_hash(
+    func: Callable,
+    include_name: bool = True,
+    include_module: bool = True,
+    include_declaration: bool = True,
+    char_count: Optional[int] = 32,
+) -> str:
+    """
+    Compute a stable hash based on a function's source code and other properties.
+
+    Args:
+        func: The function to hash
+        include_name: Whether to include the function name in the hash
+        include_module: Whether to include the module name in the hash
+        include_declaration: Whether to include the function declaration line
+        char_count: Number of characters to include in the result
+
+    Returns:
+        A hex string hash of the function's content
+    """
+    logger.debug(f"Generating content hash for function '{func.__name__}'")
+    components = get_function_components(
+        func,
+        include_name=include_name,
+        include_module=include_module,
+        include_declaration=include_declaration,
+    )
+
+    # Join all components and compute hash
+    combined = "\n".join(components)
+    logger.debug(
+        f"Function components joined, length: {len(combined)} characters"
+    )
+    return hash_to_hex(combined, char_count=char_count)
 
 
 def hash_function(
@@ -794,240 +1032,4 @@ def hash_function(
         raise ValueError(err_msg)
 
     logger.debug(f"Generated hash value as {return_type}: {hash_value}")
-    return hash_value
-
-
-# Legacy compatibility functions
-
-
-def hash_dict(d: NestedDict) -> UUID:
-    """
-    Hash a dictionary with stable results across sessions.
-
-    Args:
-        d: The dictionary to hash (can be arbitrarily nested)
-
-    Returns:
-        A UUID hash of the dictionary
-    """
-    return hash_to_uuid(d)
-
-
-def stable_hash(s: Any) -> int:
-    """
-    Create a stable hash that returns the same integer value across sessions.
-
-    Args:
-        s: The object to hash
-
-    Returns:
-        An integer hash
-    """
-    return hash_to_int(s)
-
-
-# Hashing of packets and PathSet
-
-
-class PathSetHasher:
-    def __init__(self, char_count=32):
-        self.char_count = char_count
-
-    def hash_pathset(self, pathset: PathSet) -> str:
-        if isinstance(pathset, str) or isinstance(pathset, PathLike):
-            pathset = Path(pathset)
-            if not pathset.exists():
-                raise FileNotFoundError(f"Path {pathset} does not exist")
-            if pathset.is_dir():
-                # iterate over all entries in the directory include subdirectory (single step)
-                hash_dict = {}
-                for entry in pathset.iterdir():
-                    file_name = find_noncolliding_name(entry.name, hash_dict)
-                    hash_dict[file_name] = self.hash_pathset(entry)
-                return hash_to_hex(hash_dict, char_count=self.char_count)
-            else:
-                # it's a file, hash it directly
-                return hash_file(pathset)
-
-        if isinstance(pathset, Collection):
-            hash_dict = {}
-            for path in pathset:
-                file_name = find_noncolliding_name(Path(path).name, hash_dict)
-                hash_dict[file_name] = self.hash_pathset(path)
-            return hash_to_hex(hash_dict, char_count=self.char_count)
-
-        raise ValueError(f"PathSet of type {type(pathset)} is not supported")
-
-    def hash_file(self, filepath) -> str: ...
-
-    def id(self) -> str: ...
-
-
-def hash_packet_with_psh(
-    packet: Packet, algo: PathSetHasher, prefix_algorithm: bool = True
-) -> str:
-    """
-    Generate a hash for a packet based on its content.
-
-    Args:
-        packet: The packet to hash
-        algorithm: The algorithm to use for hashing
-        prefix_algorithm: Whether to prefix the hash with the algorithm name
-
-    Returns:
-        A hexadecimal digest of the packet's content
-    """
-    hash_results = {}
-    for key, pathset in packet.items():
-        hash_results[key] = algo.hash_pathset(pathset)
-
-    packet_hash = hash_to_hex(hash_results)
-
-    if prefix_algorithm:
-        # Prefix the hash with the algorithm name
-        packet_hash = f"{algo.id()}-{packet_hash}"
-
-    return packet_hash
-
-
-def hash_packet(
-    packet: Packet,
-    algorithm: str = "sha256",
-    buffer_size: int = 65536,
-    char_count: Optional[int] = 32,
-    prefix_algorithm: bool = True,
-) -> str:
-    """
-    Generate a hash for a packet based on its content.
-
-    Args:
-        packet: The packet to hash
-
-    Returns:
-        A hexadecimal digest of the packet's content
-    """
-    hash_results = {}
-    for key, pathset in packet.items():
-        hash_results[key] = hash_pathset(
-            pathset, algorithm=algorithm, buffer_size=buffer_size
-        )
-
-    packet_hash = hash_to_hex(hash_results, char_count=char_count)
-
-    if prefix_algorithm:
-        # Prefix the hash with the algorithm name
-        packet_hash = f"{algorithm}-{packet_hash}"
-
-    return packet_hash
-
-
-def hash_pathset(
-    pathset: PathSet,
-    algorithm="sha256",
-    buffer_size=65536,
-    char_count: Optional[int] = 32,
-) -> str:
-    """
-    Generate hash of the pathset based primarily on the content of the files.
-    If the pathset is a collection of files or a directory, the name of the file
-    will be included in the hash calculation.
-
-    Currently only support hashing of Pathset if Pathset points to a single file.
-    """
-    if isinstance(pathset, str) or isinstance(pathset, PathLike):
-        pathset = Path(pathset)
-        if not pathset.exists():
-            raise FileNotFoundError(f"Path {pathset} does not exist")
-        if pathset.is_dir():
-            # iterate over all entries in the directory include subdirectory (single step)
-            hash_dict = {}
-            for entry in pathset.iterdir():
-                file_name = find_noncolliding_name(entry.name, hash_dict)
-                hash_dict[file_name] = hash_pathset(
-                    entry,
-                    algorithm=algorithm,
-                    buffer_size=buffer_size,
-                    char_count=char_count,
-                )
-            return hash_to_hex(hash_dict, char_count=char_count)
-        else:
-            # it's a file, hash it directly
-            return hash_file(
-                pathset, algorithm=algorithm, buffer_size=buffer_size
-            )
-
-    if isinstance(pathset, Collection):
-        hash_dict = {}
-        for path in pathset:
-            file_name = find_noncolliding_name(Path(path).name, hash_dict)
-            hash_dict[file_name] = hash_pathset(
-                path,
-                algorithm=algorithm,
-                buffer_size=buffer_size,
-                char_count=char_count,
-            )
-        return hash_to_hex(hash_dict, char_count=char_count)
-
-
-def hash_file(file_path, algorithm="sha256", buffer_size=65536) -> str:
-    """
-    Calculate the hash of a file using the specified algorithm.
-
-    Parameters:
-        file_path (str): Path to the file to hash
-        algorithm (str): Hash algorithm to use - options include:
-                         'md5', 'sha1', 'sha256', 'sha512', 'xxh64', 'crc32', 'hash_path'
-        buffer_size (int): Size of chunks to read from the file at a time
-
-    Returns:
-        str: Hexadecimal digest of the hash
-    """
-    # Verify the file exists
-    if not Path(file_path).is_file():
-        raise FileNotFoundError(f"The file {file_path} does not exist")
-
-    # Handle special case for 'hash_path' algorithm
-    if algorithm == "hash_path":
-        # Hash the name of the file instead of its content
-        # This is useful for cases where the file content is well known or
-        # not relevant
-        return hash_to_hex(file_path)
-
-    # Handle non-cryptographic hash functions
-    if algorithm == "xxh64":
-        hasher = xxhash.xxh64()
-        with open(file_path, "rb") as file:
-            while True:
-                data = file.read(buffer_size)
-                if not data:
-                    break
-                hasher.update(data)
-        return hasher.hexdigest()
-
-    if algorithm == "crc32":
-        crc = 0
-        with open(file_path, "rb") as file:
-            while True:
-                data = file.read(buffer_size)
-                if not data:
-                    break
-                crc = zlib.crc32(data, crc)
-        return format(crc & 0xFFFFFFFF, "08x")  # Convert to hex string
-
-    # Handle cryptographic hash functions from hashlib
-    try:
-        hasher = hashlib.new(algorithm)
-    except ValueError:
-        valid_algorithms = ", ".join(sorted(hashlib.algorithms_available))
-        raise ValueError(
-            f"Invalid algorithm: {algorithm}. Available algorithms: {valid_algorithms}, xxh64, crc32"
-        )
-
-    with open(file_path, "rb") as file:
-        while True:
-            data = file.read(buffer_size)
-            if not data:
-                break
-            hasher.update(data)
-
-    return hasher.hexdigest()
+    return hash_value
\ No newline at end of file
diff --git a/src/orcabridge/hashing/function.py b/src/orcabridge/hashing/function.py
new file mode 100644
index 0000000..244e10b
--- /dev/null
+++ b/src/orcabridge/hashing/function.py
@@ -0,0 +1,7 @@
+# Provides functions for hashing of a Python function
+import inspect
+from typing import Callable, Literal
+from uuid import UUID
+
+from .core import hash_to_hex, hash_to_int, hash_to_uuid, logger
+
diff --git a/src/orcabridge/mapper.py b/src/orcabridge/mapper.py
index 5849f89..bb5e84a 100644
--- a/src/orcabridge/mapper.py
+++ b/src/orcabridge/mapper.py
@@ -7,9 +7,8 @@
     Tuple,
     Iterator,
     Collection,
-    Any,
 )
-from orcabridge.base import Operation, SyncStream, Mapper
+from orcabridge.base import SyncStream, Mapper
 from orcabridge.stream import SyncStreamFromGenerator
 from orcabridge.utils.stream_utils import (
     join_tags,
@@ -17,7 +16,7 @@
     batch_tag,
     batch_packet,
 )
-from orcabridge.hashing import hash_function
+from orcabridge.hashing import hash_function, function_content_hash
 from .types import Tag, Packet
 from itertools import chain
 
@@ -485,7 +484,7 @@ def __init__(
         super().__init__()
         self.batch_size = batch_size
         if tag_processor is None:
-            tag_processor = lambda tags: batch_tag(tags)
+            tag_processor = lambda tags: batch_tag(tags)  # noqa: E731
 
         self.tag_processor = tag_processor
         self.drop_last = drop_last
diff --git a/src/orcabridge/py.typed b/src/orcabridge/py.typed
new file mode 100644
index 0000000..e69de29
diff --git a/src/orcabridge/store/dir_data_store.py b/src/orcabridge/store/dir_data_store.py
index 3940933..01f1777 100644
--- a/src/orcabridge/store/dir_data_store.py
+++ b/src/orcabridge/store/dir_data_store.py
@@ -1,5 +1,5 @@
-from ..types import Tag, Packet
-from typing import Optional, Collection
+from orcabridge.types import Packet
+from typing import Optional
 from pathlib import Path
 from orcabridge.hashing import hash_packet
 import shutil
@@ -156,9 +156,9 @@ def retrieve_memoized(
                     logger.info(
                         f"Supplemented source for packet {packet} at {source_path}"
                     )
-            except:
+            except (IOError, json.JSONDecodeError) as e:
                 logger.error(
-                    f"Error loading memoized output for packet {packet} from {info_path}"
+                    f"Error loading memoized output for packet {packet} from {info_path}: {e}"
                 )
                 return None
             return output_packet
diff --git a/src/orcabridge/store/file_ops.py b/src/orcabridge/store/file_ops.py
index 16c7d3e..fb46f65 100644
--- a/src/orcabridge/store/file_ops.py
+++ b/src/orcabridge/store/file_ops.py
@@ -1,10 +1,9 @@
 # file_ops.py - Atomic file operations module
 
 import os
-import time
 import logging
 from pathlib import Path
-from typing import Union, Optional, Tuple
+from typing import Union, Tuple
 
 logger = logging.getLogger(__name__)
 
diff --git a/src/orcabridge/store/safe_dir_data_store.py b/src/orcabridge/store/safe_dir_data_store.py
index 10c0e32..1017153 100644
--- a/src/orcabridge/store/safe_dir_data_store.py
+++ b/src/orcabridge/store/safe_dir_data_store.py
@@ -4,12 +4,11 @@
 import time
 import json
 import logging
-import threading
 import fcntl
 import errno
 from pathlib import Path
 from contextlib import contextmanager
-from typing import Optional, Dict, Any, Union
+from typing import Optional, Union
 
 from .file_ops import atomic_write, atomic_copy
 
@@ -237,7 +236,7 @@ def memoize(
                     logger.info(f"Entry already exists for packet {packet}")
                     return self.retrieve_memoized(store_name, content_hash, packet)
         except FileLockError:
-            logger.warning(f"Could not acquire shared lock to check completion status")
+            logger.warning("Could not acquire shared lock to check completion status")
             # Continue to try with exclusive lock
         
         # Now try to acquire an exclusive lock for writing
diff --git a/src/orcabridge/stream.py b/src/orcabridge/stream.py
index 3dc8f7a..88d5188 100644
--- a/src/orcabridge/stream.py
+++ b/src/orcabridge/stream.py
@@ -1,8 +1,5 @@
 from typing import (
-    Generator,
     Tuple,
-    Dict,
-    Any,
     Callable,
     Iterator,
     Optional,
diff --git a/src/orcabridge/tracker.py b/src/orcabridge/tracker.py
index 2d2b72f..f8a0d4a 100644
--- a/src/orcabridge/tracker.py
+++ b/src/orcabridge/tracker.py
@@ -1,5 +1,4 @@
-import threading
-from typing import Dict, Collection, List
+from typing import Dict, Collection
 import networkx as nx
 from orcabridge.base import Operation, Invocation, Tracker
 import matplotlib.pyplot as plt
diff --git a/src/orcabridge/types.py b/src/orcabridge/types.py
index 55af3d3..098e4d0 100644
--- a/src/orcabridge/types.py
+++ b/src/orcabridge/types.py
@@ -1,18 +1,18 @@
 from typing import Union, Tuple, Protocol, Mapping, Collection, Optional
-from pathlib import Path
 from typing_extensions import TypeAlias
 import os
 
 # Convenience alias for anything pathlike
 PathLike = Union[str, bytes, os.PathLike]
 
-# arbitrary depth of nested list of strings or None
-L: TypeAlias = Union[str, None, Collection[Optional[str]]]
+# an (optional) string or a collection of (optional) string values
+TagValue: TypeAlias = Union[Optional[str], Collection[Optional[str]]]
 
 
 # the top level tag is a mapping from string keys to values that can be a string or
 # an arbitrary depth of nested list of strings or None
-Tag: TypeAlias = Mapping[str, Union[str, L]]
+Tag: TypeAlias = Mapping[str, Union[str, TagValue]]
+
 
 
 # a pathset is a path or an arbitrary depth of nested list of paths
diff --git a/src/orcabridge/utils/name.py b/src/orcabridge/utils/name.py
index db46918..ba2c4f0 100644
--- a/src/orcabridge/utils/name.py
+++ b/src/orcabridge/utils/name.py
@@ -3,10 +3,6 @@
 """
 
 import re
-import inspect
-import pickle
-import types
-import ast
 
 
 def find_noncolliding_name(name: str, lut: dict) -> str:
diff --git a/src/orcabridge/utils/stream_utils.py b/src/orcabridge/utils/stream_utils.py
index ada32e1..a981587 100644
--- a/src/orcabridge/utils/stream_utils.py
+++ b/src/orcabridge/utils/stream_utils.py
@@ -2,15 +2,10 @@
 Utility functions for handling tags
 """
 
-from _collections_abc import dict_keys
 from typing import (
-    List,
-    Dict,
     Optional,
-    Any,
     TypeVar,
     Set,
-    Union,
     Sequence,
     Mapping,
     Collection,
diff --git a/tests/test_hashing/generate_file_hashes.py b/tests/test_hashing/generate_file_hashes.py
index 2a8b587..57a5e4d 100644
--- a/tests/test_hashing/generate_file_hashes.py
+++ b/tests/test_hashing/generate_file_hashes.py
@@ -7,7 +7,6 @@
 then computes and records their hashes in a JSON lookup table file.
 """
 
-import os
 import json
 import random
 import string
diff --git a/tests/test_hashing/generate_hash_examples.py b/tests/test_hashing/generate_hash_examples.py
index 585a6ac..bd266c1 100644
--- a/tests/test_hashing/generate_hash_examples.py
+++ b/tests/test_hashing/generate_hash_examples.py
@@ -3,9 +3,7 @@
 # throughout the tests to ensure consistent hashing behavior across different runs
 # and revision of the codebase.
 
-import os
 import json
-import uuid
 from pathlib import Path
 from collections import OrderedDict
 from datetime import datetime
diff --git a/tests/test_hashing/reorganize_files.py b/tests/test_hashing/reorganize_files.py
deleted file mode 100644
index b34406f..0000000
--- a/tests/test_hashing/reorganize_files.py
+++ /dev/null
@@ -1,69 +0,0 @@
-#!/usr/bin/env python
-# filepath: /home/eywalker/workspace/orcabridge/tests/test_hashing/reorganize_files.py
-"""
-Reorganize files in the test_hashing directory.
-
-This script moves files from their current locations to the new
-organized directory structure within hash_samples.
-"""
-
-import os
-import shutil
-from pathlib import Path
-
-
-def reorganize_files():
-    """Move files to their new locations."""
-    # Get the current directory
-    current_dir = Path(__file__).parent
-
-    # Create hash_samples directory if it doesn't exist
-    hash_samples_dir = current_dir / "hash_samples"
-    hash_samples_dir.mkdir(exist_ok=True)
-
-    # Create subdirectories
-    data_structures_dir = hash_samples_dir / "data_structures"
-    data_structures_dir.mkdir(exist_ok=True)
-
-    file_samples_dir = hash_samples_dir / "file_samples"
-    file_samples_dir.mkdir(exist_ok=True)
-
-    # Move existing hash examples to data_structures
-    for file in hash_samples_dir.glob("hash_examples_*.json"):
-        target_path = data_structures_dir / file.name
-        print(
-            f"Moving {file.relative_to(current_dir)} to {target_path.relative_to(current_dir)}"
-        )
-        shutil.move(str(file), str(target_path))
-
-    # Move sample files to file_samples
-    sample_files_dir = current_dir / "sample_files"
-    if sample_files_dir.exists():
-        for file in sample_files_dir.glob("*"):
-            target_path = file_samples_dir / file.name
-            print(
-                f"Moving {file.relative_to(current_dir)} to {target_path.relative_to(current_dir)}"
-            )
-            shutil.move(str(file), str(target_path))
-
-        # Remove the old directory if empty
-        if not list(sample_files_dir.glob("*")):
-            print(
-                f"Removing empty directory {sample_files_dir.relative_to(current_dir)}"
-            )
-            sample_files_dir.rmdir()
-
-    # Move file_hash_lut.json
-    file_hash_lut = current_dir / "file_hash_lut.json"
-    if file_hash_lut.exists():
-        target_path = hash_samples_dir / "file_hash_lut.json"
-        print(
-            f"Moving {file_hash_lut.relative_to(current_dir)} to {target_path.relative_to(current_dir)}"
-        )
-        shutil.move(str(file_hash_lut), str(target_path))
-
-    print("File reorganization complete!")
-
-
-if __name__ == "__main__":
-    reorganize_files()
diff --git a/tests/test_hashing/test_basic_hashing.py b/tests/test_hashing/test_basic_hashing.py
index 1473bcc..1332558 100644
--- a/tests/test_hashing/test_basic_hashing.py
+++ b/tests/test_hashing/test_basic_hashing.py
@@ -1,11 +1,9 @@
-import pytest
-from orcabridge.hashing.hashing import (
+from orcabridge.hashing.core import (
     hash_to_hex,
     hash_to_int,
     hash_to_uuid,
     HashableMixin,
     stable_hash,
-    hash_file,
 )
 
 
diff --git a/uv.lock b/uv.lock
new file mode 100644
index 0000000..57f3a92
--- /dev/null
+++ b/uv.lock
@@ -0,0 +1,901 @@
+version = 1
+revision = 2
+requires-python = ">=3.10"
+
+[[package]]
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+version = "25.1.0"
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+    { name = "mypy-extensions" },
+    { name = "packaging" },
+    { name = "pathspec" },
+    { name = "platformdirs" },
+    { name = "tomli", marker = "python_full_version < '3.11'" },
+    { name = "typing-extensions", marker = "python_full_version < '3.11'" },
+]
+sdist = { url = "https://files.pythonhosted.org/packages/94/49/26a7b0f3f35da4b5a65f081943b7bcd22d7002f5f0fb8098ec1ff21cb6ef/black-25.1.0.tar.gz", hash = "sha256:33496d5cd1222ad73391352b4ae8da15253c5de89b93a80b3e2c8d9a19ec2666", size = 649449, upload-time = "2025-01-29T04:15:40.373Z" }
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