Search results

download_ebi() - specifying multiple antibiotics

Status: Open.

#44 In AMRverse/AMRgen;

· silargi opened on Feb 6, 2026

download_ebi() function: Warnings in mutate()

Status: Open.

#43 In AMRverse/AMRgen;

· silargi opened on Feb 6, 2026

Replace "user_release" with "release" in example provided for download_ebi()

Status: Open.

#41 In AMRverse/AMRgen;

· silargi opened on Feb 5, 2026

offer something sensible to parse genotype data downloaded from EBI

Status: Open.

#38 In AMRverse/AMRgen;

· katholt opened on Jan 30, 2026

Sulfonamide to it's own "drug_class"?

Status: Open.

#35 In AMRverse/AMRgen;

· evolarjun opened on Jan 5, 2026

Generalise upset plot function to accept any genotype and quantitative phenotype

Status: Open.

#33 In AMRverse/AMRgen;

· MaxWallat opened on May 20, 2025

Tree vs geno & pheno

Status: Open.

#32 In AMRverse/AMRgen;

· meganecarey opened on May 20, 2025

modify amr_logistic and solo_ppv_analysis to accept pre-computed binary matrix

Status: Open.

#31 In AMRverse/AMRgen;

· katholt opened on May 1, 2025

get_binary_matrix - to do list

Status: Open.

#29 In AMRverse/AMRgen;

· katholt opened on Mar 23, 2025

Implement unit testing

Status: Open.

#24 In AMRverse/AMRgen;

· msberends opened on Feb 5, 2025

Replace old functions

Status: Open.

#23 In AMRverse/AMRgen;

· msberends opened on Feb 5, 2025

export pheno data to NCBI antibiogram

Status: Open.

#22 In AMRverse/AMRgen;

· katholt opened on Feb 5, 2025