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Do you have to use different phenotype data in step3 of ldpred to logistic regression?

Status: Open.

#20 In AshleyLab/risk_scores;

· jackosullivanoxford opened on Oct 9, 2019

Determining time of follow-up visit in UKBB data

Status: Open.

#19 In AshleyLab/risk_scores;

· jackosullivanoxford opened on Oct 1, 2019

Results of sensitivity analysis when including TIA as event outcome

Status: Open.

#18 In AshleyLab/risk_scores;

· jackosullivanoxford opened on Sep 19, 2019

Phenotype data from UKBB

Status: Open.

#16 In AshleyLab/risk_scores;

· jackosullivanoxford opened on Jun 18, 2019

Validation data

Status: Open.

#15 In AshleyLab/risk_scores;

· jackosullivanoxford opened on Jun 18, 2019

Compare the effect allele of GWAS SS and UKBB AFib Plink files

Status: Open.

#14 In AshleyLab/risk_scores;

· jackosullivanoxford opened on Jun 17, 2019

Make detailed methods/protocol

Status: Open.

#11 In AshleyLab/risk_scores;

· jackosullivanoxford opened on May 20, 2019

If the PRS deciles still put the highest prevalence of ischemic stroke in the lowest decile group - check the following

Status: Open.

#9 In AshleyLab/risk_scores;

· jackosullivanoxford opened on Apr 30, 2019

Test PRS on non-AFib patients with phenotype of ischemic stroke or no ischemic stroke

Status: Open.

#8 In AshleyLab/risk_scores;

· jackosullivanoxford opened on Apr 16, 2019

Important covariates to include in logistic regression

Status: Open.

#7 In AshleyLab/risk_scores;

· jackosullivanoxford opened on Apr 15, 2019

Make definitive files of a) total number of patients that have Afib in UKBB b) European patients with AFib in UKBB c) European patients with AFib with first degree relatives removed

Status: Open.

#6 In AshleyLab/risk_scores;

· jackosullivanoxford opened on Apr 15, 2019

Steps to create kinship coefficient file and, ultimately, remove first degree relatives

Status: Open.

#5 In AshleyLab/risk_scores;

· jackosullivanoxford opened on Apr 8, 2019