DCscope (formerly Shape-Out) is a graphical user interface for the analysis and visualization of RT-DC datasets.

Documentation

The documentation, including the code reference and examples, is available at dcscope.readthedocs.io.

Installation

Installers for Windows and macOS are available at the release page.

If you have Python 3 installed, you can install DCscope with

pip install dcscope

Citing DCscope

Please cite DCscope either in-line

(...) using the analysis software DCscope (formerly Shape-Out) version 2.X.X
(available at https://github.com/DC-analysis/DCscope).

or in a bibliography

Paul Müller and others (2019), DCscope (formerly Shape-Out) version 2.X.X:
Analysis software for real-time deformability cytometry [Software].
Available at https://github.com/DC-analysis/DCscope.

and replace 2.X.X with the version of DCscope that you used.

Testing

pip install -e .
pip install -r tests/requirements.txt
pytest tests