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An interactive Streamlit web application showcasing my PhD research on phytoplankton size structure and community dynamics in lake ecosystems.

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Debbcwing/Plankton_model_app

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🌊 Plankton Model App

An interactive Streamlit web application showcasing PhD research on phytoplankton size structure and community dynamics in lake ecosystems.

Streamlit App

📋 Overview

This application provides an interactive interface to explore research on:

  • Size-based plankton ecosystem models
  • Grazing strategies and their impact on phytoplankton communities
  • Environmental factors influencing plankton population dynamics
  • Nutrient regimes and seasonal variations in lake ecosystems

Key Features

  • 🤖 AI-Powered Q&A: Ask questions about the research and get answers powered by RAG (Retrieval-Augmented Generation)
  • 📊 Interactive Data Visualizations: Explore model outputs and simulation results
  • 📚 Publication Library: Access peer-reviewed manuscripts from the PhD studies with downloadable PDFs
  • 🎨 Visual Storytelling: Learn about phytoplankton ecology through infographics

📝 License

This project is open source and available under the MIT License.

👤 Author

Sze-Wing To

  • Research Focus: Plankton ecology and lake ecosystem modeling
  • Affiliation: Constructor University Alumni & Constructor Academy

📧 Contact

For questions about the research or this application:

🙏 Acknowledgments

  • Constructor University, Bremen
  • Leibniz Centre for Tropical Marine Research (ZMT)

📚 Citation

If you use this work in your research, please cite:

@article{to2024grazing,
  title={Grazing strategies determine the size composition of phytoplankton in eutrophic lakes},
  author={To, Sze-Wing and Acevedo-Trejos, Esteban and Chakraborty, Subhendu and Pomati, Francesco and Merico, Agostino},
  journal={Limnology and Oceanography},
  volume={69},
  pages={933--946},
  year={2024},
  doi={10.1002/lno.12538}
}

@article{to2025ecological,
  title={Ecological and environmental factors influencing exclusion patterns of phytoplankton size classes in lake systems},
  author={To, Sze-Wing and Acevedo-Trejos, Esteban and Smith, Sherwood Lan and Chakraborty, Subhendu and Merico, Agostino},
  journal={Ecological Modelling},
  volume={499},
  pages={110936},
  year={2025},
  doi={10.1016/j.ecolmodel.2024.110936}
}

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An interactive Streamlit web application showcasing my PhD research on phytoplankton size structure and community dynamics in lake ecosystems.

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