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@caherzee caherzee released this 23 May 13:31
· 36 commits to master since this release
v4.1.4
1fc34c4

elPrep binaries compiled with go1.12.5.

Small bug fixes:

  • Fixed /dev/stdin and /dev/stdout for sfm
  • Fixed the detection of directory path names in sfm

Extensions:

  • Added --tmp-path option for sfm for specifying the path where directories for temporary files are created.
  • Added merge-optical-duplicates-metrics command for merging intermediate metrics files created using the --mark-optical-duplicates-intermediate option.

Update documentation with options for writing your own split/filter/merge scripts. See:
--mark-optical-duplicates-intermediate, --bqsr-tables-only, --bqsr-apply.

Many thanks to Geert Vandeweyer, Amin Ardeshirdavani, and Tuan Li.

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