hoboR

An R package for the analysis of HOBO weather station data. The HOBO files as CSV, time formats accepted: DD/MM/YYYY, MM/DD/YYYY, YY/MM/DD

Documentation

manual.github.io/hoboR

Install using devtools

This project is available on GitHub at http://github.com/LeBoldus and can be installed using devtools. We are working on a CRAN version.

For Windows 'install from R cran', then you need to install from the Rtools45 installer or 64-bit ARM Rtools45 installer.

ggplo2 (4.0.1) incompatible with rlang, use ggplot2 4.0.0.

install.packages("devtools")
library("devtools")
# Installing hoboR through devtools
devtools::install_github("LeBoldus-Lab/hoboR")
library(hoboR)

Required dependencies if not installed

install.packages("dplyr")
install.packages("plyr")
install.packages("lubridate")
install.packages("reshape")
install.packages("ggplot2")
install.packages("devtools")

---

HoboR usage

Download the csv files from inst/extdata/

path <- "~/directory/csv_files"

# Important data structure formsy, ypu may need to skip some rows
#  channels must bet set on OFF, unless you are calibrating [see calibration](https://leboldus-lab.github.io/hoboR//2024/04/05/hobor-calibration.html)
hobofiles <- hobinder(path, header = T, skip = 1, channels = "OFF") 
cleanfiles <- hobocleaner(hobofiles, format = "ymd")

# get summary statistics
hobodata <- meanhobo(cleanfiles, summariseby = "5 mins", na.rm = T)

Read the Manual

License

This work is subject to the MIT License

Acknowledgements

United States Department of Agriculture Co-operative agreement number: 58-2072-1-039

Contributors and Errors

Welcome pull submission through Github pull request. Please report errors or requests using GitHub issues.