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Vacuum response for 3D geometries #131

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031315e
Merge branch 'jmh/kernel_refactor' of https://github.com/OpenFUSIONTo…
jhalpern30 Jan 6, 2026
25c7942
VACUUM - WIP - isolating plasma only into vacuum calculations in prep…
jhalpern30 Jan 7, 2026
e6afc7d
Merge branch 'develop' of https://github.com/OpenFUSIONToolkit/JPEC i…
jhalpern30 Jan 15, 2026
d12d49a
VACUUM - WIP - current state of 3D code
jhalpern30 Jan 20, 2026
0c5ef38
Merge branch 'more_vacuum_cleanups' of https://github.com/OpenFUSIONT…
jhalpern30 Jan 21, 2026
9a44f01
VACUUM - BUGFIX - block indices for kernel with walls
jhalpern30 Jan 21, 2026
f4c23c3
VACUUM - BUGFIX - lost a factor of dth in the fourier transforms
jhalpern30 Jan 21, 2026
a775973
VACUUM - IMPROVEMENT - kernel updates
jhalpern30 Jan 21, 2026
7eec939
minor
jhalpern30 Jan 21, 2026
7ca6545
VACUUM - WIP - vectorizing trig basis
jhalpern30 Jan 21, 2026
7d90cdb
VACUUM - WIP - final cleanups to 2D response, updating example tests,…
jhalpern30 Jan 21, 2026
72f3276
VACUUM - WIP - creation of PlasmaGeometry3D struct, messing with inte…
jhalpern30 Jan 22, 2026
247fd7c
VACUUM - WIP - first attempt at creating a Julia 3D kernel function b…
jhalpern30 Jan 22, 2026
9a7cf87
VACUUM - WIP - 3D code running through, spitting out garbage
jhalpern30 Jan 23, 2026
a423d7a
VACUUM - WIP - debugging of 3D portions, refactoring indexing into mu…
jhalpern30 Jan 26, 2026
37b4294
VACUUM - IMPROVEMENT - julia conversion now matching c++ outputs, add…
jhalpern30 Jan 27, 2026
c17a3b3
VACUUM - IMPROVEMENT - cleanups to PlasmaGeometry3D struct
jhalpern30 Jan 27, 2026
d3f5019
VACUUM - IMPROVEMENT - 3D response matrix agreeing with 2D!
jhalpern30 Jan 28, 2026
d53f1fc
VACUUM - WIP - removing nu from initialization
jhalpern30 Jan 29, 2026
463e9c9
VACUUM - WIP - starting my massive cleanup journey, cleaning up multi…
jhalpern30 Jan 29, 2026
42ec877
VACUUM - IMPROVEMENT - sparse array approach for interpolation
jhalpern30 Jan 29, 2026
11a5b93
VACUUM - WIP - adding aspect ratio check and some scans
jhalpern30 Jan 30, 2026
4f78be1
VACUUM - IMPROVEMENT - optimized kernels for scalar arithmetic, 0.5x …
jhalpern30 Jan 30, 2026
df75367
VACUUM - improvement - adding in-place functions and preallocation ma…
jhalpern30 Jan 30, 2026
c6f79af
VACUUM - IMPROVEMENT - views for obs/src array slices + inbounds. 30%…
jhalpern30 Jan 30, 2026
05a20e1
VACUUM - IMPROVEMENT - faster mod1 operation, removing allocations fr…
jhalpern30 Jan 30, 2026
38fceb8
VACUUM - WIP - adding singular parameters as inputs, docstring cleanu…
jhalpern30 Feb 3, 2026
5647dbf
VACUUM - WIP - resizing logic for kernel function, first attempt at 3…
jhalpern30 Feb 4, 2026
6ccac0d
VACUUM - WIP - adding PATCH_RAD in both dimensions based on average a…
jhalpern30 Feb 5, 2026
2a29d8b
VACUUM - WIP - updating project.toml
jhalpern30 Feb 5, 2026
b5977ff
VACUUM - WIP - implementing normal_orient, fixing 2D bugs in the wall…
jhalpern30 Feb 5, 2026
1b305b3
VACUUM - WIP - fixing normal_orient in 3D
jhalpern30 Feb 5, 2026
1683e6c
Merge branch 'develop' of https://github.com/OpenFUSIONToolkit/JPEC i…
jhalpern30 Feb 6, 2026
65675c4
VACUUM - WIP - reducing PR diff. Removing changes to DIIID example an…
jhalpern30 Feb 6, 2026
c5cf94b
Merge branch 'develop' of https://github.com/OpenFUSIONToolkit/JPEC i…
jhalpern30 Feb 6, 2026
721cbbf
VACUUM - WIP - adding new 3D example and fixing fourier transforms
jhalpern30 Feb 6, 2026
8a98044
Merge branch 'develop' of https://github.com/OpenFUSIONToolkit/JPEC i…
jhalpern30 Feb 6, 2026
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1 change: 1 addition & 0 deletions .gitignore
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Original file line number Diff line number Diff line change
Expand Up @@ -18,3 +18,4 @@ docs/build/
anaconda_projects/
modovmc
pestotv
Vacuum3D_temp/
4 changes: 4 additions & 0 deletions Project.toml
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Original file line number Diff line number Diff line change
Expand Up @@ -8,6 +8,7 @@ version = "0.1.0"
DiffEqCallbacks = "459566f4-90b8-5000-8ac3-15dfb0a30def"
Documenter = "e30172f5-a6a5-5a46-863b-614d45cd2de4"
FFTW = "7a1cc6ca-52ef-59f5-83cd-3a7055c09341"
FastGaussQuadrature = "442a2c76-b920-505d-bb47-c5924d526838"
HDF5 = "f67ccb44-e63f-5c2f-98bd-6dc0ccc4ba2f"
Interpolations = "a98d9a8b-a2ab-59e6-89dd-64a1c18fca59"
JLD2 = "033835bb-8acc-5ee8-8aae-3f567f8a3819"
Expand All @@ -16,6 +17,7 @@ OrdinaryDiffEq = "1dea7af3-3e70-54e6-95c3-0bf5283fa5ed"
Pkg = "44cfe95a-1eb2-52ea-b672-e2afdf69b78f"
Plots = "91a5bcdd-55d7-5caf-9e0b-520d859cae80"
Printf = "de0858da-6303-5e67-8744-51eddeeeb8d7"
SparseArrays = "2f01184e-e22b-5df5-ae63-d93ebab69eaf"
SpecialFunctions = "276daf66-3868-5448-9aa4-cd146d93841b"
StaticArrays = "90137ffa-7385-5640-81b9-e52037218182"
TOML = "fa267f1f-6049-4f14-aa54-33bafae1ed76"
Expand All @@ -25,6 +27,7 @@ Test = "8dfed614-e22c-5e08-85e1-65c5234f0b40"
DiffEqCallbacks = "4.9.0"
Documenter = "1.14.1"
FFTW = "1.9.0"
FastGaussQuadrature = "1"
HDF5 = "0.17.2"
Interpolations = "0.16.1"
JLD2 = "0.6.3"
Expand All @@ -33,6 +36,7 @@ OrdinaryDiffEq = "6.102.0"
Pkg = "1.11.0"
Plots = "1.40.15"
Printf = "1.11.0"
SparseArrays = "1.11.0"
SpecialFunctions = "2.5.1"
StaticArrays = "1.9.15"
TOML = "1.0.3"
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