Skip to content

Linting and formatting Python code in Google Colab

License

Notifications You must be signed in to change notification settings

RektPunk/colablinter

Repository files navigation

colablinter

PyPI version License: MIT

Overview

colablinter is an IPython magic command extension designed specifically for Jupyter and Google Colab notebooks.

It integrates the high-speed linter ruff to perform code quality checks and enforce standards directly within Jupyter/Colab cells.

It allows developers to lint and format code on a cell-by-cell basis or check the entire notebook with simple commands.

Magic cell Commands

Command Type Description
%%cfix Cell Magic Fixes and Formats the current cell's code.
%%creport Cell Magic Displays a linting report for the current cell.
%clautofix Line Magic Activates or deactivates automatic code fixing and formatting before every cell execution.
%clreport Line Magic Displays a linting report for the entire saved notebook (requires Google Drive mount).

After executing a cell magic command, the fixed/reported code is immediately executed (if applicable), maintaining the notebook workflow.

Installation

Requires Python 3.10 or newer.

pip install colablinter

Usage

The extension must be explicitly loaded in the notebook session before use. Once the extension is loaded, %clautofix is triggered automatically.

%load_ext colablinter
  1. Fix and Format cell (%%cfix)

    %%cfix corrects code and runs the formatter. The cell executes the fixed code.

    %%cfix
    import math, sys;
    
    class Example(   object ):
        def __init__    ( self, bar ):
          if bar : bar+=1;  bar=bar* bar   ; return bar
          else:
                        some_string = "foo"
                        return (sys.path, some_string)

    Fixed Cell:

    import math
    import sys
    
    
    class Example(object):
        def __init__(self, bar):
            if bar:
                bar += 1
                bar = bar * bar
                return bar
            else:
                some_string = "foo"
                return (sys.path, some_string)
  2. Check cell quality (%%creport)

    Use %%creport to see linting reports for the code below the command. After the report is displayed, the code in the cell executes as normal.

    %%creport
    
    def invalid_code(x):
        return x + y # 'y' is not defined

    Output:

    [ColabLinter:INFO] F821 Undefined name `y`
    --> notebook_cell.py:2:16
    |
    1 | def invalid_code(x):
    2 |     return x + y # 'y' is not defined
    |                  ^
    |
    
    Found 1 error.

    Note on F401: The linter is explicitly configured to ignore F401 errors (unused imports). This is to ensure compatibility with the stateful nature of Jupyter/Colab notebooks, where imports in one cell may be necessary for code execution in subsequent cells, preventing unintended breakage of the notebook's execution flow.

  3. Activate/Deactivate Auto Fix (%clautofix)

    The %clautofix line magic allows you to automatically fix code before every code cell is executed.

    To Activate Auto Fixing:

    %clautofix on # %clautofix off when you want to deactivate
  4. Check entire notebook (%clreport)

    Use line magic %clreport to check across the entire saved notebook file (requires the notebook to be saved to Google Drive and mounted).

    %clreport /content/drive/MyDrive/Colab Notebooks/path/to/notebook.ipynb

Known Caveats & Troubleshooting

Magic Command Execution: When using magic or terminal commands with %clautofix on active, the autofix mechanism is temporarily suppressed during the final execution step to prevent infinite loops or dual checks. If you want to disable auto-fixing, use %clautofix off