West German Genome Center
The new home for workflows and software made by / for the WGGC
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- Germany
- https://wggc.de/
- @WGGC_de
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- bcl2fastq2_Pipeline Public
A snakemake-based workflow for converting Illumina's bcl files to fastq files with the option of further downstream analysis (using FastQC, STAR+RSeQC, cutadapt) and encryption via gocryptfs
WestGermanGenomeCenter/bcl2fastq2_Pipeline’s past year of commit activity - deep_snake Public
deep_snake - snakemake-based deepconsensus (Pacbio SequelII subreads - to deepconsensus.fastq)
WestGermanGenomeCenter/deep_snake’s past year of commit activity - BulkRNASeqGUI Public
A shiny / TCC-GUI based application for users RNASeq data analysis / exploratory plotting
WestGermanGenomeCenter/BulkRNASeqGUI’s past year of commit activity - BNG_nanotatoR Public
A human-first SV annotation snakemake pipeline based on nanotatoR working with optical mapping (Bionano Genomics) data
WestGermanGenomeCenter/BNG_nanotatoR’s past year of commit activity
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