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This is to differentiate `--best` cases: - 0 - 1 - other values
- Add the help on personal database indexing and public ribosomal databases re-indexing
Upgrade the Sortmerna wrapper
- Add tool_dependencies to download and install genometools - Add .shed.yml file
- 2 input files - 2 expected output files
The script takes 2 input files corresponding to r1 and r2. It formats these files to add .1 or .2 at the end of each sequence description if it is not present (needed for reago)
- Configuration of reago parameters - Call of the needed scripts (format_reago_input_file, filter_input and reago)
package_genometools was moved to tools-iuc repository in a PR
- Add /env in first line - Change first character test by startswith
- Change ";" by "&&" in cheetah code
- Remove cpu_nb parameter and use instead \${GALAXY_SLOTS:-4}
- Change owner of genometools package
Reago integration
Add tool metilene
update metilene wrapper
this is interpreted as a missing link by the parser
fix sailfish help
numeric clustering tool
SVM classification tool set added.
Scipy toolkit
…ain and value input files.
Discriminant classifier and mainmacros updated for having separate tr…
nn_classifier temporary rollbacks. clustering update.
Add the comment to let people know the requirement will try to be resolved using BioPython Conda: https://anaconda.org/anaconda/biopython
Add the comment to let people know the requirement will try to be resolved using BioPython Conda: https://anaconda.org/anaconda/biopython
Comment for BioPython Conda
Early testing, 16.04 is not released yet.
* upgrade to metilene 0.2.6 * Test metilene from now on.
* confab update * Update .travis.yml
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thank you