This repository contains R source files used for analyzing white-faced capuchin home ranges.
Campos, F.A., Bergstrom, M.L., Childers, A., Hogan, J.D., Jack, K.M., Melin, A.D., Mosdossy K.N., Myers, M.S., Parr, N.A., Sargeant, E., Schoof, V.A.M., and Fedigan, L.M. (2014). Drivers of home range characteristics across spatiotemporal scales in a neotropical primate, Cebus capucinus. Animal Behaviour 91: 93-109. doi: 10.1016/j.anbehav.2014.03.007
The raw data are not posted because I don't own them all.
Contact me if you are interested in the data sets referred to in the source files.
Other files:
- HomeRanges.R: The primary R code for preparing and analyzing the data
- Models.R: R scripts for applying the linear-mixed effects model analysis
- Plots.R: R scripts for creating most of the plots
- HomeRanges.Rmd: R markdown file used to generate an HTML report (see below)
- HRModels.Rmd: R markdown file used to generate an HTML report (see below)
- BRBMethod.R: contains a function to batch-apply the biased random bridge home range method in the package adehabitatHR
Full instructions for reproducing the analysis can be found here.