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updates to java 21 bytecode#321

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denis-yuen merged 6 commits intodevelopfrom
feature/java_21_bytecode
Feb 18, 2026
Merged

updates to java 21 bytecode#321
denis-yuen merged 6 commits intodevelopfrom
feature/java_21_bytecode

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Description
Updates to Java 21, will need documentation/ui update to follow

Review Instructions
Builds pass

Issue
https://ucsc-cgl.atlassian.net/browse/SEAB-6269

Security
If there are any concerns that require extra attention from the security team, highlight them here.

Please make sure that you've checked the following before submitting your pull request. Thanks!

  • Check that you pass the basic style checks and unit tests by running ./mvnw clean install
  • If this PR is for a user-facing feature, create and link a documentation ticket for this feature (usually in the same milestone as the linked issue). Style points if you create a documentation PR directly and link that instead.

@denis-yuen denis-yuen self-assigned this Feb 17, 2026
@denis-yuen
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See also dockstore/dockstore#6226

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codecov bot commented Feb 18, 2026

Codecov Report

✅ All modified and coverable lines are covered by tests.
✅ Project coverage is 23.71%. Comparing base (b790582) to head (1d76ddb).
⚠️ Report is 1 commits behind head on develop.

Additional details and impacted files
@@              Coverage Diff              @@
##             develop     #321      +/-   ##
=============================================
- Coverage      23.76%   23.71%   -0.05%     
+ Complexity       399      396       -3     
=============================================
  Files             48       48              
  Lines           6046     6046              
  Branches         800      800              
=============================================
- Hits            1437     1434       -3     
- Misses          4420     4422       +2     
- Partials         189      190       +1     
Flag Coverage Δ
bitbuckettests 0.00% <ø> (ø)
confidentialtooltests 0.00% <ø> (ø)
confidentialworkflowtests 0.00% <ø> (ø)
nonconfidentialtests 23.04% <ø> (-0.05%) ⬇️
singularitytests 0.00% <ø> (ø)
toilintegrationtests 15.29% <ø> (ø)
unittests 0.47% <ø> (ø)

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@denis-yuen
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sonar warning is about our own shared action

@sonarqubecloud
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Quality Gate Failed Quality Gate failed

Failed conditions
2 Security Hotspots

See analysis details on SonarQube Cloud

@denis-yuen denis-yuen marked this pull request as ready for review February 18, 2026 18:02
@denis-yuen denis-yuen requested review from a team, nolunwa-ucsc and svonworl and removed request for a team February 18, 2026 18:02
@denis-yuen denis-yuen merged commit b150072 into develop Feb 18, 2026
19 of 21 checks passed
@denis-yuen denis-yuen deleted the feature/java_21_bytecode branch February 18, 2026 20:28
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2 participants