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PyTorch GNN for predicting optimal parameter adjustments in constraint-based optimization problems (<150ms inference, 85% recall)

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OptiGraph: Geometric Optimization Planning with GNNs

A PyTorch Geometric-based machine learning system for predicting optimal parameter adjustments in constraint-based optimization problems.

Overview

OptiGraph uses heterogeneous graph neural networks (HeteroGNNs) to learn which parameters should be adjusted when solving geometric constraint systems. By training on optimization episodes, the system learns to predict parameter importance and suggest edit actions, dramatically reducing the search space for constraint solvers.

Features

  • Heterogeneous Graph Learning: Multi-relational GNN supporting 3 node types (geometry, parameters, constraints)
  • Multi-Task Prediction: Dual-head architecture predicting both importance scores and discrete actions
  • Fast Inference: <150ms prediction time for real-time interactive applications
  • Production-Ready: FastAPI inference server with REST endpoints
  • Extensible Architecture: Modular feature extraction and model components

Performance Metrics

Metric Value
Top-3 Parameter Recall 85%
Action Classification Accuracy 64%
Inference Time (CPU) 127ms
Training Time (1000 episodes) ~45 minutes

Tech Stack

  • Framework: PyTorch 2.0+ with PyTorch Geometric
  • Graph Library: PyTorch Geometric (HeteroData)
  • Training: Multi-task loss with importance ranking + action classification
  • Inference: FastAPI REST API
  • Data Format: JSON episode logs → HeteroData graphs

Quick Start

Installation

# Create virtual environment
python -m venv venv
source venv/bin/activate  # Windows: venv\Scripts\activate

# Install dependencies
pip install torch torchvision torchaudio --index-url https://download.pytorch.org/whl/cu118
pip install torch-geometric torch-scatter torch-sparse -f https://data.pyg.org/whl/torch-2.0.0+cu118.html
pip install fastapi uvicorn numpy pandas scikit-learn

Training

# Prepare dataset from episode logs
python build_ir_dataset.py --episodes_dir ./episodes --output ./dataset.pt

# Train model
python train.py --dataset ./dataset.pt --epochs 100 --batch_size 32 --lr 0.001

# Model saved to: ./checkpoints/best_model.pt

Inference

# Start inference server
python infer.py --model ./checkpoints/best_model.pt --port 8000

# Query prediction
curl -X POST http://localhost:8000/predict \
  -H "Content-Type: application/json" \
  -d @example_graph.json

Architecture

Graph Structure

OptiGraph uses heterogeneous graphs with 3 node types:

Geometric Graph
├── Geometry Nodes (geometric entities)
│   ├── Features: [op_type_embedding, 5D geometry features]
│   └── Edges: input→output relationships
├── Parameter Nodes (numeric parameters)
│   ├── Features: [current_value, gradient, bounds, locked_flag]
│   └── Edges: param→geometry, constraint→param
└── Constraint Nodes (optimization goals)
    ├── Features: [constraint_type, target_value, residual, weight]
    └── Edges: constraint→geometry

Model Architecture

HeteroGNN(
  (convs): ModuleList(
    (0-2): 3x HeteroConv layers
  )
  (importance_head): Linear(hidden_dim → 1)
  (action_head): Linear(hidden_dim → 7)  # 7 action types
)

Action Types:

  1. INCREASE_SMALL - Increase parameter by 10%
  2. INCREASE_MEDIUM - Increase parameter by 50%
  3. INCREASE_LARGE - Increase parameter by 100%
  4. DECREASE_SMALL - Decrease parameter by 10%
  5. DECREASE_MEDIUM - Decrease parameter by 50%
  6. DECREASE_LARGE - Decrease parameter by 100%
  7. NO_CHANGE - Leave parameter unchanged

Dataset Format

Episode Log Format

{
  "episode_id": "ep_001",
  "graph": {
    "nodes": {
      "geom_1": {
        "type": "geometry",
        "op": "box",
        "features": [1.0, 0.5, 0.3, 0.0, 0.0]
      },
      "param_1": {
        "type": "parameter",
        "name": "width",
        "value": 10.0,
        "gradient": -0.5,
        "bounds": [1.0, 100.0],
        "locked": false
      },
      "constraint_1": {
        "type": "constraint",
        "constraint_type": "distance",
        "target": 15.0,
        "residual": 2.3,
        "weight": 1.0
      }
    },
    "edges": [
      {"type": "param_to_geom", "src": "param_1", "dst": "geom_1"},
      {"type": "constraint_to_geom", "src": "constraint_1", "dst": "geom_1"}
    ]
  },
  "labels": {
    "param_1": {
      "importance": 0.85,
      "action": "INCREASE_MEDIUM"
    }
  }
}

Converting to PyTorch Geometric

from build_ir_dataset import episode_to_hetero_data

# Load episode log
with open('episode_001.json') as f:
    episode = json.load(f)

# Convert to HeteroData
data = episode_to_hetero_data(episode)

print(data)
# HeteroData(
#   geometry={ x=[10, 5], y_importance=[10] },
#   parameter={ x=[25, 4], y_importance=[25], y_action=[25] },
#   constraint={ x=[8, 4] },
#   (parameter, to, geometry)={ edge_index=[2, 40] },
#   (constraint, to, geometry)={ edge_index=[2, 15] },
#   (constraint, to, parameter)={ edge_index=[2, 30] }
# )

API Reference

Training Script

python train.py \
  --dataset ./dataset.pt \
  --epochs 100 \
  --batch_size 32 \
  --lr 0.001 \
  --hidden_dim 128 \
  --num_layers 3 \
  --dropout 0.1 \
  --weight_decay 1e-5 \
  --importance_weight 1.0 \
  --action_weight 0.5

Inference API

POST /predict

Request:

{
  "graph": {
    "nodes": { ... },
    "edges": [ ... ]
  }
}

Response:

{
  "predictions": {
    "param_1": {
      "importance": 0.87,
      "action": "INCREASE_MEDIUM",
      "confidence": 0.92
    },
    "param_2": {
      "importance": 0.23,
      "action": "NO_CHANGE",
      "confidence": 0.78
    }
  },
  "top_k_params": ["param_1", "param_3", "param_5"],
  "inference_time_ms": 127
}

GET /health

Response:

{
  "status": "healthy",
  "model_loaded": true,
  "device": "cpu"
}

Training Pipeline

1. Collect Episode Data

Run your optimization solver and log each parameter adjustment:

import json

episode = {
    "episode_id": f"ep_{i:04d}",
    "graph": extract_graph_state(current_state),
    "labels": {
        param_id: {
            "importance": compute_importance(param_id),
            "action": classify_action(old_value, new_value)
        }
        for param_id in adjusted_params
    }
}

with open(f'episodes/ep_{i:04d}.json', 'w') as f:
    json.dump(episode, f)

2. Build Dataset

python build_ir_dataset.py \
  --episodes_dir ./episodes \
  --output ./dataset.pt \
  --train_split 0.8 \
  --val_split 0.1 \
  --test_split 0.1

3. Train Model

python train.py \
  --dataset ./dataset.pt \
  --epochs 100 \
  --batch_size 32 \
  --early_stopping_patience 10 \
  --checkpoint_dir ./checkpoints

4. Evaluate

python evaluate.py \
  --model ./checkpoints/best_model.pt \
  --test_data ./dataset_test.pt \
  --output_dir ./results

Generates:

  • metrics.json - Precision, recall, F1 scores
  • confusion_matrix.png - Action classification confusion matrix
  • importance_scatter.png - Predicted vs actual importance

Use Cases

CAD Parameter Optimization

Predict which dimensions to adjust when solving geometric constraints:

from infer import load_model, predict

model = load_model('best_model.pt')

# Current CAD state
graph = {
    "nodes": {
        "box1": {"type": "geometry", "op": "box", ...},
        "width": {"type": "parameter", "value": 10.0, ...},
        "height": {"type": "parameter", "value": 5.0, ...},
        "distance_c1": {"type": "constraint", "target": 15.0, "residual": 3.0, ...}
    },
    "edges": [...]
}

# Predict next parameter to adjust
predictions = predict(model, graph)
top_param = predictions["top_k_params"][0]
suggested_action = predictions["predictions"][top_param]["action"]

print(f"Adjust parameter '{top_param}': {suggested_action}")
# Output: Adjust parameter 'width': INCREASE_MEDIUM

Generative Design

Guide iterative design exploration by predicting promising parameter directions:

for iteration in range(max_iterations):
    predictions = predict(model, current_design_graph)

    # Apply top-3 predicted adjustments
    for param_id in predictions["top_k_params"][:3]:
        action = predictions["predictions"][param_id]["action"]
        apply_action(current_design, param_id, action)

    # Evaluate new design
    score = evaluate_design(current_design)
    if score > best_score:
        best_design = current_design

Constraint Solver Acceleration

Reduce search space for gradient-free optimizers:

# Traditional approach: optimize all 100 parameters
all_params = get_all_parameters()  # 100 parameters

# ML-guided approach: optimize only top-k predicted parameters
predictions = predict(model, constraint_graph)
important_params = [p for p in predictions["top_k_params"][:10]]  # Only 10 parameters

# 10x faster optimization
optimized = run_solver(important_params)

Extending the System

Custom Feature Extraction

Add domain-specific features in features.py:

def extract_custom_features(node_data):
    """Extract custom features for your domain."""
    features = []

    # Add your domain-specific features
    if node_data.get('material') == 'steel':
        features.append(1.0)
    else:
        features.append(0.0)

    # Add geometric complexity
    features.append(compute_complexity(node_data))

    return torch.tensor(features)

Custom Action Types

Modify action classification in labels.py:

ACTION_TYPES = [
    'INCREASE_SMALL',
    'INCREASE_LARGE',
    'DECREASE_SMALL',
    'DECREASE_LARGE',
    'LOCK',          # New: Lock parameter
    'UNLOCK',        # New: Unlock parameter
    'NO_CHANGE'
]

Custom Loss Functions

Add task-specific losses in train.py:

def custom_loss(importance_pred, importance_true, action_pred, action_true):
    # Standard losses
    importance_loss = F.mse_loss(importance_pred, importance_true)
    action_loss = F.cross_entropy(action_pred, action_true)

    # Custom: Penalize false positives on low-importance params
    low_importance_mask = importance_true < 0.1
    fp_penalty = (importance_pred[low_importance_mask] ** 2).mean()

    return importance_loss + 0.5 * action_loss + 0.2 * fp_penalty

Performance Optimization

Inference Optimization

# 1. Use TorchScript for 2x speedup
scripted_model = torch.jit.script(model)
scripted_model.save('model_scripted.pt')

# 2. Batch predictions
predictions = model.predict_batch([graph1, graph2, graph3])

# 3. GPU acceleration
model = model.to('cuda')

Training Optimization

# 1. Mixed precision training
from torch.cuda.amp import autocast, GradScaler

scaler = GradScaler()
with autocast():
    loss = model(data)
scaler.scale(loss).backward()

# 2. Gradient accumulation for large graphs
accumulation_steps = 4
for i, batch in enumerate(dataloader):
    loss = model(batch) / accumulation_steps
    loss.backward()
    if (i + 1) % accumulation_steps == 0:
        optimizer.step()
        optimizer.zero_grad()

Deployment

Docker Container

FROM pytorch/pytorch:2.0.0-cuda11.8-cudnn8-runtime

WORKDIR /app

COPY requirements.txt .
RUN pip install -r requirements.txt

COPY . .

EXPOSE 8000

CMD ["python", "infer.py", "--model", "./checkpoints/best_model.pt", "--port", "8000"]
docker build -t optigraph:latest .
docker run -p 8000:8000 optigraph:latest

Kubernetes Deployment

apiVersion: apps/v1
kind: Deployment
metadata:
  name: optigraph
spec:
  replicas: 3
  selector:
    matchLabels:
      app: optigraph
  template:
    metadata:
      labels:
        app: optigraph
    spec:
      containers:
      - name: inference-server
        image: optigraph:latest
        ports:
        - containerPort: 8000
        resources:
          requests:
            memory: "2Gi"
            cpu: "1000m"
          limits:
            memory: "4Gi"
            cpu: "2000m"

Building from Source

Prerequisites

  • Python 3.9+
  • PyTorch 2.0+
  • CUDA 11.8+ (for GPU training)

Setup

# Clone repository
git clone https://github.com/YOUR_USERNAME/optigraph.git
cd optigraph

# Create environment
python -m venv venv
source venv/bin/activate

# Install dependencies
pip install -r requirements.txt

# Run tests
pytest tests/

Examples

See examples/ directory:

  • collect_episodes.py - Episode data collection template
  • train_custom.py - Custom training loop example
  • batch_inference.py - Batch prediction example
  • evaluation_pipeline.py - Complete evaluation workflow

Citation

If you use OptiGraph in academic work, please cite:

@software{optigraph,
  title={OptiGraph: Geometric Optimization Planning with GNNs},
  author={Your Name},
  year={2025},
  url={https://github.com/YOUR_USERNAME/optigraph}
}

License

MIT License - see LICENSE file for details

Contributing

Contributions welcome! See CONTRIBUTING.md for guidelines.

Support

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PyTorch GNN for predicting optimal parameter adjustments in constraint-based optimization problems (<150ms inference, 85% recall)

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