Search results

Docker error

Status: Open.

#139 In draeger-lab/ModelPolisher;

· lcottret opened on Jun 17, 2025

MP inconsistently removes "LPAREN" and "RPAREN" from GeneProduct names

2.1Issue in the 2.1 branchIssue in the 2.1 branch

bug

Status: Open.

#138 In draeger-lab/ModelPolisher;

· Schmoho opened on Dec 1, 2024

2.1 regression introduces invalid compartment and parameter references

2.1Issue in the 2.1 branchIssue in the 2.1 branch

bug

urgentSevere issue that needs to be fixed asapSevere issue that needs to be fixed asap

Status: Open.

#137 In draeger-lab/ModelPolisher;

· Schmoho opened on Dec 1, 2024

MP fails to identify and remove identifiers resources with whitespace-ID

2.1Issue in the 2.1 branchIssue in the 2.1 branch

bug

Status: Open.

#136 In draeger-lab/ModelPolisher;

· Schmoho opened on Dec 1, 2024

MP (probably: JSBML) gives wrong tags to render elements

2.1Issue in the 2.1 branchIssue in the 2.1 branch

bug

upstreamBug or issue in upstream, ticket might be kept while issue is not resolved.Bug or issue in upstream, ticket might be kept while issue is not resolved.

Status: Open.

#135 In draeger-lab/ModelPolisher;

· Schmoho opened on Dec 1, 2024

MP deletes empty fbc:objectives [COBRA_WARNING]

2.1Issue in the 2.1 branchIssue in the 2.1 branch

bug

Status: Open.

#134 In draeger-lab/ModelPolisher;

· Schmoho opened on Dec 1, 2024

MP introduces (or: reveals) cobrapy validation errors on kinetic laws

2.1Issue in the 2.1 branchIssue in the 2.1 branch

bug

Status: Open.

#133 In draeger-lab/ModelPolisher;

· Schmoho opened on Dec 1, 2024

Docker image not found

documentation

support

Status: Open.

#132 In draeger-lab/ModelPolisher;

· IlFog opened on Oct 29, 2024

Implement Explicit Version Handling

2.2

featureIssues that aim to introduce new feature in ModelPolisher.Issues that aim to introduce new feature in ModelPolisher.

Status: Open.

#131 In draeger-lab/ModelPolisher;

· Schmoho opened on Oct 23, 2024

fix broken/legacy identifiers.org URLs

2.2

featureIssues that aim to introduce new feature in ModelPolisher.Issues that aim to introduce new feature in ModelPolisher.

Status: Open.

#126 In draeger-lab/ModelPolisher;

· Schmoho opened on Jul 19, 2024

Add annotations for KEGG pathways and genes

2.2

featureIssues that aim to introduce new feature in ModelPolisher.Issues that aim to introduce new feature in ModelPolisher.

Status: Open.

#107 In draeger-lab/ModelPolisher;

· NantiaL opened on May 3, 2022

Spurious annotations

2.2

bug

Status: Open.

#89 In draeger-lab/ModelPolisher;

· mephenor opened on Jan 27, 2020