[MAIN] Add pyproject toml setup

pyproject.toml

@@ -0,0 +1,49 @@
+[build-system]
+requires = [
+     "setuptools",
+]
+build-backend = "setuptools.build_meta"
+
+[project]
+version = "0.1.0"
+name = "farms_sim"
+description = "FARMS package for sim simulations"
+readme = "README.md"
+license = "Apache-2.0"
+license-files = ["LICENSE"]
+requires-python = ">= 3.11"
+dependencies = [
+    "numpy <= 1.26.4",
+    "matplotlib",
+    "farms_core",
+]
+keywords = ["farms", "framework", "animals", "robot", " modeling", "simulation"]
+classifiers = [
+  "Development Status :: 3 - Beta",
+  # Indicate who your project is intended for
+  "Intended Audience :: Science/Research",
+  "ScieTopic :: Scientific/Engineering",
+  "Topic :: Scientific/Engineering :: Artificial Intelligence",
+  "Topic :: Scientific/Engineering :: Artificial Life",
+  # Specify the Python versions you support here.
+  "Programming Language :: Python :: 3.11",
+]
+
+[project.urls]
+Homepage = "https://farmsim.dev"
+Documentation = "https://farmsim.dev"
+Repository = "https://github.com/farmsim/farms_sim.git"
+Issues = "https://github.com/farmsim/farms_sim/issues"
+Changelog = "https://github.com/me/spam/blob/master/CHANGELOG.md"
+
+[project.optional-dependencies]
+analysis = []
+
+[tool.setuptools.packages.find]
+# This is equivalent to find_packages() with no arguments
+
+[tool.setuptools]
+include-package-data = true
+
+[tool.setuptools.package-data]
+farms_sim = []

setup.py

@@ -1,113 +1,10 @@
 #!/usr/bin/env python
 """ Setup script """
 
-from setuptools import setup, find_packages
-from setuptools.extension import Extension
-from setuptools import dist
-
-dist.Distribution().fetch_build_eggs(['numpy'])
-import numpy as np  # pylint: disable=wrong-import-position
-
-dist.Distribution().fetch_build_eggs(['Cython>=0.15.1'])
-from Cython.Build import cythonize  # pylint: disable=wrong-import-position
-from Cython.Compiler import Options  # pylint: disable=wrong-import-position
-
-dist.Distribution().fetch_build_eggs(['farms_core'])
-from farms_core import get_include_paths  # pylint: disable=wrong-import-position
-
-
-# Cython options
-DEBUG = False
-Options.docstrings = True
-Options.embed_pos_in_docstring = False
-Options.generate_cleanup_code = False
-Options.clear_to_none = True
-Options.annotate = False
-Options.fast_fail = False
-Options.warning_errors = False
-Options.error_on_unknown_names = True
-Options.error_on_uninitialized = True
-Options.convert_range = True
-Options.cache_builtins = True
-Options.gcc_branch_hints = True
-Options.lookup_module_cpdef = False
-Options.embed = None
-Options.cimport_from_pyx = False
-Options.buffer_max_dims = 8
-Options.closure_freelist_size = 8
+from setuptools import setup
 
 
 setup(
     name='farms_sim',
-    version='0.1',
-    author='farmsdev',
-    author_email='biorob-farms@groupes.epfl.ch',
-    description='FARMS package for sim simulations',
-    # license='BSD-3',
-    keywords='farms control simulation',
-    # url='',
-    # packages=['farms_sim'],
-    packages=find_packages(),
-    # long_description=read('README'),
-    # classifiers=[
-    #     'Development Status :: 3 - Alpha',
-    #     'Topic :: Utilities',
-    #     'License :: OSI Approved :: BSD License',
-    # ],
-    scripts=[],
-    # package_data={'farms_sim': [
-    #     'farms_sim/templates/*',
-    #     'farms_sim/config/*'
-    # ]},
-    include_package_data=True,
-    include_dirs=[np.get_include()],
-    ext_modules=cythonize(
-        [
-            Extension(
-                f'farms_sim.{folder}.*',
-                sources=[f'farms_sim/{folder}/*.pyx'],
-                extra_compile_args=['-O3'],  # , '-fopenmp'
-                extra_link_args=['-O3']  # , '-fopenmp'
-            )
-            for folder in []
-        ],
-        include_path=[np.get_include()] + get_include_paths(),
-        compiler_directives={
-            # Directives
-            'binding': False,
-            'embedsignature': True,
-            'cdivision': True,
-            'language_level': 3,
-            'infer_types': True,
-            'profile': True,
-            'wraparound': False,
-            'boundscheck': DEBUG,
-            'nonecheck': DEBUG,
-            'initializedcheck': DEBUG,
-            'overflowcheck': DEBUG,
-            'overflowcheck.fold': DEBUG,
-            'cdivision_warnings': DEBUG,
-            'always_allow_keywords': DEBUG,
-            'linetrace': DEBUG,
-            # Optimisations
-            'optimize.use_switch': True,
-            'optimize.unpack_method_calls': True,
-            # Warnings
-            'warn.undeclared': True,
-            'warn.unreachable': True,
-            'warn.maybe_uninitialized': True,
-            'warn.unused': True,
-            'warn.unused_arg': True,
-            'warn.unused_result': True,
-            'warn.multiple_declarators': True,
-        }
-    ),
     zip_safe=False,
-    install_requires=[
-        'farms_core',
-        'farms_mujoco',
-        'cython',
-        'numpy',
-        'trimesh',
-    ],
 )