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force_onesample in main and condition-level config files

Status: Open.

#29 In freddolino-lab/ipod;

· jwschroeder3 opened on Sep 13, 2023

EPOD .narrowpeak file format

Status: Open.

#28 In freddolino-lab/ipod;

· yulduz1 opened on Jun 30, 2022

Update spikenorm_samples docs to inlcude case where not doing spikenorm

Status: Open.

#24 In freddolino-lab/ipod;

· jwschroeder3 opened on Oct 14, 2021

Suggest spearman

Status: Open.

#23 In freddolino-lab/ipod;

· rebeccahurto opened on Oct 13, 2021

Do PCA to see whether similar samples cluster together

Status: Open.

#22 In freddolino-lab/ipod;

· jwschroeder3 opened on Aug 4, 2021

Check for low number of reads and low alignment quality, exit with error message if not good enough

Status: Open.

#21 In freddolino-lab/ipod;

· jwschroeder3 opened on Aug 4, 2021

Run initial check for config options that aren't present

Status: Open.

#20 In freddolino-lab/ipod;

· jwschroeder3 opened on Jul 16, 2021

Stop directing bowtie2-inspect output to stdout

Status: Open.

#18 In freddolino-lab/ipod;

· jwschroeder3 opened on Jul 7, 2021