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SynBioCAD Galaxy Project

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  1. RetroPath2 RetroPath2 Public archive

    Perform retrosynthesis to calculate possible metabolic routes from a collection of sink files to a target

    Python 2 3

  2. rpExtractSink rpExtractSink Public archive

    Docker image of the rpExtractSink tool

    Python 1

  3. rpMergeSBML rpMergeSBML Public archive

    Merge two SBML files based on the MIRIAM annotation and InChiKey

    Python 1 1

  4. synbiocad-galaxy-wrappers synbiocad-galaxy-wrappers Public archive

    rpTools Galaxy Wrappers

    HTML 1

  5. rp2paths rp2paths Public archive

    Enumerate the individual pathways from the metabolic routes generated by RetroPath2

    Python

  6. rpMakeSource-galaxy rpMakeSource-galaxy Public archive

    Generate a csv file for a target input to RetroPath2

    Python

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