Search results

Dockstore import error

Status: Open.

#19 In hall-lab/sv-pipeline;

· LauraEgolf opened on Mar 31, 2021

download ref_cache file

Status: Open.

#18 In hall-lab/sv-pipeline;

· ZhengHeWei opened on Oct 13, 2020

Error while pulling sv-pipeline docker image

Status: Open.

#17 In hall-lab/sv-pipeline;

· nitha26 opened on Sep 29, 2020

cromwell 35 errors out on workflow

Status: Open.

#15 In hall-lab/sv-pipeline;

· ghost opened on Sep 20, 2018

Add dockerfile for smoove

Status: Open.

#14 In hall-lab/sv-pipeline;

· ernfrid opened on Sep 13, 2018

Add dockerfile for manta

Status: Open.

#13 In hall-lab/sv-pipeline;

· ernfrid opened on Sep 13, 2018

Ensure cnvnator calls are retained

Status: Open.

#12 In hall-lab/sv-pipeline;

· ernfrid opened on Sep 13, 2018

Ensure pipefail set for all steps with pipes.

Status: Open.

#10 In hall-lab/sv-pipeline;

· ernfrid opened on Nov 24, 2017

Merge_SV.inputs.wdl should probably be renamed to Merge_SV.inputs.json

Status: Open.

#9 In hall-lab/sv-pipeline;

· ernfrid opened on Sep 26, 2017

Add support for either non-chr and chr containing chromosome names

Status: Open.

#8 In hall-lab/sv-pipeline;

· ernfrid opened on Sep 26, 2017

hexdump is missing from lumpy container

Status: Open.

#6 In hall-lab/sv-pipeline;

· ernfrid opened on May 18, 2017