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@nicodr97 nicodr97 changed the title [WIP] Add more info to verbose Add more info to verbose Nov 3, 2025
@nicodr97 nicodr97 marked this pull request as ready for review November 3, 2025 11:54
if (gapsInColumn[residueIndex] <= maxGaps) {
newAlig->saveResidues[residueIndex] = residueIndex;
numberColumnsToRecover--;
newNumberKeptResidues++;
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Could it be possible that "newNumberKeptResidues" is computed as the number of original residues - number of columns to recover (or similar variable)? It would prevent having to add more operations to the loop.

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3 participants