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Remove undesired print when quiet=True #5

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Remove undesired print when quiet=True #5

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2fc0039
Fix undesired print with quiet=True
mmestreprofluent Apr 25, 2024
24bcc92
Fix undesired print with quiet=True
mmestreprofluent Apr 25, 2024
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23 changes: 14 additions & 9 deletions pyblast/utils.py
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Original file line number Diff line number Diff line change
Expand Up @@ -56,28 +56,33 @@ def write(self, data, mode="w", wodesc=False) :

# decorator to time functions
def ftiming(f):
def wrap(*args, **kwargs):
# Receive 'quiet' from kwargs and use it directly
quiet = kwargs.get('quiet', False) # This will not modify kwargs

def wrap(* args, ** kwargs):

funcname = kwargs.pop("funcname", f.__name__)
funcname = funcname or "Unknown funcname"

time1 = time.time()
ret = f(* args, ** kwargs)
ret = f(*args, **kwargs)
time2 = time.time()

print('{:s} function took {:.3f} ms'.format(funcname, (time2-time1) * 1000.0))


# Only print if 'quiet' is False
if not quiet:
print('{:s} function took {:.3f} ms'.format(funcname, (time2 - time1) * 1000.0))

return ret

return wrap

def run_cmdline(cmdline, funcname=None, quiet=False) :
if not quiet : return run_cmdline_loud(cmdline, funcname=funcname)
def run_cmdline(cmdline, funcname=None, quiet=False):
# Pass all original parameters to the function
if not quiet:
return run_cmdline_loud(cmdline, funcname=funcname, quiet=quiet)
return check_output(cmdline, universal_newlines=True, shell=True)

@ftiming
def run_cmdline_loud(cmdline, funcname=None) :
def run_cmdline_loud(cmdline, funcname=None, quiet=False):
return check_output(cmdline, universal_newlines=True, shell=True)

"""
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