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This repository contains an implementation of ULIME and Domain Specific Superpixelization applied on two models trained on Liver and Pancreatic tumors.

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kaitlyn-kobayashi/ulime_github

 
 

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Comparing ULIME with L2 LIME and Cosine LIME

Training a CNN model on Liver and Pancreatic Tumors

  • The dataset has been kept private due to patient data confidentiality. However, the outputs from our actual experiments have been preserved.
  • Both liver_model.ipynb and pancreas_model.ipynb show the train/validation loss graphs and performance metrics of the trained models.

Domain Specific Superpixelization

  • The dataset has been kept private due to patient data confidentiality. However, the outputs from our actual experiments have been preserved.
  • domain_superpixelization.ipynb shows our superpixelization method applied on liver and pancreatic tumors.

Here are some of our domain specific superpixelization ULIME explanations for Liver and Pancreatic tumors. We first compare our version with the authors default quickshift algorithm.

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We then request comments from a professional radiologist (Dr. Richard Kinh Gian Do from the New York Sloan Kettering Cancer Research Center), verifying the explanations.

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This repository contains an implementation of ULIME and Domain Specific Superpixelization applied on two models trained on Liver and Pancreatic tumors.

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