Remove absolute filepaths, use conda for more dependencies#5

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EthanHolleman wants to merge 11 commits intokernco:masterfrom

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Commits on Feb 18, 2021

Add note about changing the argument when using the script
EthanHolleman
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Remove calls to BedClip from a local filepath and replace to use conda installation
EthanHolleman
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Add note about the spp_stats rule. I don't think this will run in the current state since the shell command refers to a local script (run_spp.r) which does not seem to be included in the repo. Not …
EthanHolleman
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Remove bedGraphToBigWig since has been moved to conda dependency
EthanHolleman
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Add run_spp.R script and modify spp_stats rule to use local path
EthanHolleman
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Merge pull request #2 from EthanHolleman/run_spp
EthanHolleman
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