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Package conflict in abritamr

Status: Open.

#35 In maxlcummins/pipelord;

· Tu6ka opened on Sep 25, 2023

ECtyper name column is wrong

Status: Open.

#31 In maxlcummins/pipelord;

· maxlcummins opened on Aug 12, 2022

QC workflow bug

Status: Open.

#30 In maxlcummins/pipelord;

· maxlcummins opened on Aug 11, 2022

kraken workflow inconsistently defines database for kraken and bracken when downloaded db is used

Status: Open.

#25 In maxlcummins/pipelord;

· maxlcummins opened on Jul 20, 2022

kma installation spits out stdout into the snakemake log

Status: Open.

#24 In maxlcummins/pipelord;

· maxlcummins opened on Jul 19, 2022

summary files incorrectly generated with addition of new samples following previous run

Status: Open.

#10 In maxlcummins/pipelord;

· maxlcummins opened on Jul 1, 2021

Move blast bin path from pointfinder workflow to config file

Status: Open.

#5 In maxlcummins/pipelord;

· maxlcummins opened on Jun 2, 2021

Snakemake log attachment causes final job fail

Status: Open.

#2 In maxlcummins/pipelord;

· maxlcummins opened on Feb 19, 2021