This repository corresponds to the scripts used to perform the experimental evaluations of TREE-QMC.

The TREE-QMC method, which estimates a species tree from binary gene trees, was introduced in this paper:

• Han and Molloy, 2023, Improving quartet graph construction for scalable and accurate species tree estimation from gene trees, Genome Research (Special issue for RECOMB 2023) 33: 1042-1052. doi:10.1101/gr.277629.122