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Changed #!/usr/bin/python for #!/usr/bin/env python, because if it is left in that way it won't complete execution of the fusioncatcher-build.py script
sh: 1: add_custom_gene.py: not found
ERROR: Workflow execution failed at step 25 while executing:
add_custom_gene.py \
--organism homo_sapiens \
--output /media/sequentia/visitors/visitor3/fusioncatcher/data/
If add_custom_gene.py is executed as the command above outside of the script, the result is the following
bash: /media/sequentia/visitors/visitor3/fusioncatcher/bin/add_custom_gene.py: /usr/bin/python: bad interpreter: No such file or directory