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Hifiasm: primary contigs vs processed unitigs

Status: Open.

#182 In nf-core/genomeassembler;

· conjon42 opened on Feb 15, 2026

REPORT generation fails with tmpdir error in containerized environments

bugSomething isn't workingSomething isn't working

Status: Open.

#179 In nf-core/genomeassembler;

· wbau opened on Nov 20, 2025

QUAST QC step fails when running de novo assembly without reference genome

bugSomething isn't workingSomething isn't working

Status: Open.

#178 In nf-core/genomeassembler;

· wbau opened on Nov 20, 2025

Read phasing?

enhancementNew feature or requestNew feature or request

questionFurther information is requestedFurther information is requested

Status: Open.

#134 In nf-core/genomeassembler;

· nschan opened on Mar 25, 2025

More elegant handling of versions for report

enhancementNew feature or requestNew feature or request

Status: Open.

#112 In nf-core/genomeassembler;

· nschan opened on Feb 27, 2025