Skip to content

New hackathon project: funcprofiler and North Carolina local hub#3747

Open
nickp60 wants to merge 6 commits intonf-core:mainfrom
nickp60:main
Open

New hackathon project: funcprofiler and North Carolina local hub#3747
nickp60 wants to merge 6 commits intonf-core:mainfrom
nickp60:main

Conversation

@nickp60
Copy link

@nickp60 nickp60 commented Feb 3, 2026

Hello, I'd love some help getting funcprofiler over the line, and am happy to host a local hub if there is interest among other North Carolinians!

@netlify /events/2026/hackathon-march-2026/nc

@netlify
Copy link

netlify bot commented Feb 3, 2026

Deploy Preview for nf-core-main-site ready!

Name Link
🔨 Latest commit ac899a3
🔍 Latest deploy log https://app.netlify.com/projects/nf-core-main-site/deploys/6982175ee1dfaa000828a165
😎 Deploy Preview https://deploy-preview-3747--nf-core-main-site.netlify.app/events/2026/hackathon-march-2026/nc
📱 Preview on mobile
Toggle QR Code...

QR Code

Use your smartphone camera to open QR code link.

To edit notification comments on pull requests, go to your Netlify project configuration.

@github-actions github-actions bot deleted a comment from netlify bot Feb 3, 2026
@nickp60 nickp60 assigned jfy133 and unassigned jfy133 Feb 3, 2026
@nickp60 nickp60 requested a review from jfy133 February 3, 2026 15:01
@nickp60
Copy link
Author

nickp60 commented Feb 3, 2026

Thanks for the help @mashehu!!

@jfy133 jfy133 changed the title drafting project and site docs New hackathon project: funcprofiler and North Carolina local hub Feb 4, 2026
Copy link
Member

@jfy133 jfy133 left a comment

Choose a reason for hiding this comment

The reason will be displayed to describe this comment to others. Learn more.

Looks good, reasonable tasks too!

slack: https://nfcore.slack.com/team/U08V65MQSV9
---

We aim to release v0.1 of the read-based metagenome functional profiling `funcprofiler` pipeline.
Copy link
Member

Choose a reason for hiding this comment

The reason will be displayed to describe this comment to others. Learn more.

Suggested change
We aim to release v0.1 of the read-based metagenome functional profiling `funcprofiler` pipeline.
We aim to release v1.0.0 of the read-based metagenome functional profiling `funcprofiler` pipeline.

Conventionally nf-core pipelines start at 1.0.0 for the first release


## Description

Currently funcprofiler can successfully run fmhfunprofiler, HUMAnNv3, HUMAnNv4. RGI-BWT is in the works, pending module acceptance. There are a number of tasks to address before the pipeline can be submitted for review. Additionally, if users have specific tools they wish to add, this would be a great time to contribute!
Copy link
Member

Choose a reason for hiding this comment

The reason will be displayed to describe this comment to others. Learn more.

Suggested change
Currently funcprofiler can successfully run fmhfunprofiler, HUMAnNv3, HUMAnNv4. RGI-BWT is in the works, pending module acceptance. There are a number of tasks to address before the pipeline can be submitted for review. Additionally, if users have specific tools they wish to add, this would be a great time to contribute!
Currently funcprofiler can successfully run `fmhfunprofiler`, `HUMAnNv3`, `HUMAnNv4`. `RGI-BWT` is in the works, pending module acceptance.
There are a number of tasks to address before the pipeline can be submitted for review.
Additionally, if users have specific tools they wish to add, this would be a great time to contribute!

Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment

Labels

None yet

Projects

None yet

Development

Successfully merging this pull request may close these issues.

3 participants