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Changed REQUIREMENTS.txt and added a environment.yml file #131

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Changed REQUIREMENTS.txt and added a environment.yml file #131

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19 changes: 12 additions & 7 deletions REQUIREMENTS.txt
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Original file line number Diff line number Diff line change
@@ -1,22 +1,27 @@
git+https://github.com/openvar/variantValidator@master#egg=VariantValidator
git+https://github.com/openvar/variantFormatter@master#egg=VariantFormatter
git+https://github.com/openvar/vv_flask-restful-swagger@master#egg=vv_flask_restful_swagger
flask

Werkzeug==2.3.3
flask_restx
Flask-RESTful==0.3.9
flask-log
flask-mail
flask-restful
gunicorn
biocommons.seqrepo>=0.5.1
httplib2>=0.9.0
configparser>=3.5.0
pyliftover>=0.3
biotools>=0.3.0
biocommons.seqrepo
httplib2
configparser
pyliftover
biotools
mysql-connector-python
requests
pytest>=3.6
pytest
pytest-cov
codecov
dicttoxml



# I took the original file and tweaked the first 3 entries
# to avoid compatibility issues
7 changes: 7 additions & 0 deletions environment.yml
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Original file line number Diff line number Diff line change
@@ -0,0 +1,7 @@
name: ray_variantValidator
channels:
- conda-forge
- bioconda
dependencies:
- python
- pip