Long overdue update

.github/PULL_REQUEST_TEMPLATE.md

@@ -29,7 +29,7 @@
     folder.
 -->
 
-- [ ] Add a [news fragment](https://landlab.readthedocs.io/en/master/development/contribution/index.html#news-entries) file entry if necessary?
+- [ ] Add a [news fragment](https://landlab.csdms.io/development/contribution/#news-entries) file entry if necessary?
 - [ ] Add / update tests if necessary?
 - [ ] Add new / update outdated documentation?
 - [ ] All tests have passed?
@@ -42,7 +42,7 @@
 
      Helpful links:
 
-      Developer guide: https://landlab.readthedocs.io/en/master/development
+      Developer guide: https://landlab.csdms.io/development/
       Ask a question or submit an issue: https://github.com/landlab/landlab/issues
       Landlab Slack channel: https://landlab.slack.com
 -->

.github/actions/build-bdist/action.yml

@@ -0,0 +1,37 @@
+name: "Build a binary distribution"
+inputs:
+  cibw-only:
+    required: true
+  upload-name:
+    required: true
+runs:
+  using: "composite"
+  steps:
+    - name: Python 3.12
+      uses: actions/setup-python@v5
+      with:
+        python-version: 3.12
+
+    - name: Print build identifiers
+      shell: bash -l {0}
+      run: |
+        python -m pip install cibuildwheel
+        python -m cibuildwheel --only ${{ inputs.cibw-only }} --print-build-identifiers
+
+    - name: Install openmp
+      if: runner.os == 'macOS'
+      shell: bash -l {0}
+      run: |
+        curl -O https://mac.r-project.org/openmp/openmp-13.0.0-darwin21-Release.tar.gz
+        sudo tar fvxz openmp-13.0.0-darwin21-Release.tar.gz -C /
+
+    - name: Build wheels
+      uses: pypa/cibuildwheel@v2.21.2
+      with:
+        only: ${{ inputs.cibw-only }}
+
+    - uses: actions/upload-artifact@v4
+      with:
+        name: ${{ inputs.upload-name }}
+        path: ${{ github.workspace }}/wheelhouse/*.whl
+        overwrite: true

.github/actions/run-notebooks/action.yml

@@ -0,0 +1,56 @@
+name: "Run notebooks"
+inputs:
+  python-version:
+    required: true
+  pytest-addopts:
+    required: false
+    default: ''
+  nox-session:
+    required: true
+  upload-name:
+    required: false
+    default: ''
+runs:
+  using: "composite"
+  steps:
+    - uses: actions/checkout@v4
+    - name: Python ${{ inputs.python-version }}
+      uses: actions/setup-python@v5
+      with:
+        python-version: ${{ inputs.python-version }}
+
+    - uses: actions/download-artifact@v4
+      name: Download build artifacts
+      with:
+        pattern: "build-*"
+        merge-multiple: true
+        path: ${{ github.workspace }}/dist
+
+    - name: Test
+      env:
+        OPENTOPOGRAPHY_API_KEY: ${{ inputs.opentopography_api_key }}
+        MPLBACKEND: "module://matplotlib_inline.backend_inline"
+        PYTEST_ADDOPTS: ${{ inputs.pytest-addopts }}
+      shell: bash -l {0}
+      run: |
+        pip install nox
+        nox --verbose -s ${{ inputs.nox-session }} \
+            --force-pythons=${{ inputs.python-version }} \
+            -- dist/
+
+    - name: Find executed notebooks
+      shell: bash -l {0}
+      run: |
+        for f in $(git diff --name-only); do
+          mkdir -p executed/$(dirname $f);
+          cp $f executed/$(dirname $f);
+        done
+        ls -R executed/
+
+    - name: Upload executed notebooks
+      if: ${{ inputs.upload-name != '' }}
+      uses: actions/upload-artifact@v4
+      with:
+        name: ${{ inputs.upload-name }}
+        path: executed/
+        overwrite: true

.github/actions/run-tests/action.yml

@@ -0,0 +1,43 @@
+name: "Run tests"
+inputs:
+  python-version:
+    required: true
+  pytest-addopts:
+    required: true
+  nox-session:
+    required: true
+  codedov-token:
+    required: true
+
+runs:
+  using: "composite"
+  steps:
+    - uses: actions/checkout@v4
+    - name: Python ${{ inputs.python-version }}
+      uses: actions/setup-python@v5
+      with:
+        python-version: ${{ inputs.python-version }}
+
+    - uses: actions/download-artifact@v4
+      name: Download build artifacts
+      with:
+        pattern: "build-*"
+        merge-multiple: true
+        path: ${{ github.workspace }}/dist
+
+    - name: Test
+      env:
+        HYPOTHESIS_PROFILE: "ci"
+        MPLBACKEND: "Agg"
+        PYTEST_ADDOPTS: ${{ inputs.pytest-addopts }}
+      shell: bash -l {0}
+      run: |
+        pip install nox
+        nox --verbose -s ${{ inputs.nox-session }} \
+            --force-pythons=${{ inputs.python-version }} \
+            -- dist/
+
+    - name: Upload coverage reports to Codecov
+      uses: codecov/codecov-action@v5
+      with:
+        token: ${{ inputs.codecov-token }}

.github/workflows/changelog.yml

@@ -23,6 +23,6 @@ jobs:
         if: contains(github.event.pull_request.labels.*.name, 'skip news') != true
         run: |
           if ! pipx run towncrier check --compare-with origin/${{ github.base_ref }}; then
-          echo "Please see https://landlab.readthedocs.io/en/master/development/contribution/index.html?highlight=towncrier#news-entries for guidance."
+          echo "Please see https://landlab.csdms.io/en/master/development/contribution/index.html?highlight=towncrier#news-entries for guidance."
             false
           fi