Allow string tilenames, apply global shift to instance segmentation, and package fsct module locally to fix import issues#2
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dluks wants to merge 23 commits intophilwilkes:mainfrom
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Allow string tilenames, apply global shift to instance segmentation, and package fsct module locally to fix import issues#2dluks wants to merge 23 commits intophilwilkes:mainfrom
dluks wants to merge 23 commits intophilwilkes:mainfrom
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* add global shifting to fix chull error * fix indexing error * no need to shift stem nodes
* only convert tile name to int if all digits * get neighboring tiles by full filename, not assuming 3-digit identifiers * fix minor errors and remove unused imports * allow string tilenames; minor formatting * don't truncate tilenames and assume ints * print current buffer tile; remove int requirement for tilenames * remove in-loop print statement that messes with tqdm
Conflicts: fsct/points2trees.py fsct/run.py
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This update does the following:
inttype if the tile IDs (read from the tile index) are already all digits (allow string-based tilenames when input data is already tiled, such as "2_11")