oceanVal

Marine ecosystem model validation made easy in Python

Installation

oceanVal should be used with Python versions 3.10-3.13.

You can install the latest release oceanVal from conda-forge as follows:

conda install conda-forge::oceanval

You can install the development version of oceanVal from GitHub using the following steps.

First, clone this directory:

git clone https://github.com/pmlmodelling/oceanval.git

Then move to this directory.

cd oceanval

Second, set up a conda environment. If you want the envionment to called something other than oceanval, you can change the name in the oceanval.yml file.

conda env create -f oceanval.yml

Activate this environment.

conda activate oceanval

Now, sometimes R package installs go wrong in conda. Run the following command to ensure Rcpp is installed correctly.

Rscript -e "install.packages('Rcpp', repos = 'https://cloud.r-project.org/')"

Now, install the package.

pip install .

```sh
conda activate oceanval

Now, install the package.

pip install .

Alternatively, install the conda environment and package using the following commands:

    conda env create --name oceanval -f https://raw.githubusercontent.com/pmlmodelling/oceanval/main/oceanval.yml
    conda activate oceanval​
    pip install git+https://github.com/pmlmodelling/oceanval.git​

A website and user guide is available at: https://oceanval.readthedocs.io/en/latest/.