Skip to content

Popular repositories Loading

  1. lightweight-registration lightweight-registration Public

    lwreg is a lightweight registration system for chemical registration and data storage.

    Jupyter Notebook 81 19

  2. Ensembler Ensembler Public

    Ensembler is a python package that provides fast and easy access to 1D and 2D model system simulations. It can be used for method development or to deepen understanding of a broad spectrum of model…

    Python 55 9

  3. GNNImplicitSolvent GNNImplicitSolvent Public

    Implicit Solvent Approach Based on Generalised Born and Transferable Graph Neural Networks for Molecular Dynamics Simulations

    Jupyter Notebook 52 6

  4. GHOST GHOST Public

    Jupyter Notebook 50 13

  5. overlapping_assays overlapping_assays Public

    Code and datasets from the manuscript "Comparing IC50 or Ki values from different sources is a source of significant noise".

    Jupyter Notebook 45 9

  6. amp_bms amp_bms Public

    Python 39 6

Repositories

Showing 10 of 51 repositories
  • TorsionAngularBinStrings Public

    Torsion Angular Bin Strings: Quantifying flexibility by introducing a discrete vector representation of a conformer's dihedral angles to allow for counting of states.

    rinikerlab/TorsionAngularBinStrings’s past year of commit activity
    Jupyter Notebook 16 MIT 2 0 0 Updated Jan 29, 2026
  • rinikerlab/molecular_balances’s past year of commit activity
    Jupyter Notebook 0 0 0 0 Updated Jan 13, 2026
  • amp_bms Public
    rinikerlab/amp_bms’s past year of commit activity
    Python 39 MIT 6 2 0 Updated Jan 10, 2026
  • TorsionMotifTorsionAngleDistributions Public

    Unraveling Torsional Preferences: Comparative Analysis of Torsion Motif Torsion Angle Distributions Across Different Environments

    rinikerlab/TorsionMotifTorsionAngleDistributions’s past year of commit activity
    Jupyter Notebook 1 MIT 0 0 0 Updated Jan 7, 2026
  • lightweight-registration Public

    lwreg is a lightweight registration system for chemical registration and data storage.

    rinikerlab/lightweight-registration’s past year of commit activity
    Jupyter Notebook 81 MIT 19 7 2 Updated Jan 2, 2026
  • ALG_mannosyltransferase Public

    Scripts for molecular dynamics for ALG9 and analysis

    rinikerlab/ALG_mannosyltransferase’s past year of commit activity
    Jupyter Notebook 0 0 0 0 Updated Dec 18, 2025
  • DASH-tree Public

    Partial Charge assignment for Molecular Dynamics

    rinikerlab/DASH-tree’s past year of commit activity
    Python 23 MIT 6 0 2 Updated Dec 15, 2025
  • TorsionDistributionFitting Public

    A tool for the automatic fitting of torsion motif angle distributions with Wrapped Mirrored Gaussians.

    rinikerlab/TorsionDistributionFitting’s past year of commit activity
    Jupyter Notebook 1 MIT 0 0 0 Updated Nov 19, 2025
  • rinikerlab/conformational_domino’s past year of commit activity
    Jupyter Notebook 0 0 0 0 Updated Oct 10, 2025
  • rinikerlab/cooperative-free-energy’s past year of commit activity
    Jupyter Notebook 0 0 0 0 Updated Sep 22, 2025

People

This organization has no public members. You must be a member to see who’s a part of this organization.

Most used topics

Loading…