Adds -f flag to use a custom CSV [f]ile of barcodes.#47
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sclamons wants to merge 1 commit intorrwick:masterfrom
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Adds -f flag to use a custom CSV [f]ile of barcodes.#47sclamons wants to merge 1 commit intorrwick:masterfrom
sclamons wants to merge 1 commit intorrwick:masterfrom
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@rrwick, first off- great repository. Second, any thoughts on merging this into the main repo? As I would rather not alter the hard-coded adapters file, I'm going to clone this fork for now as it solves my use case. |
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Adds the ability to use custom barcodes defined in a (user-specified) CSV file using a -f flag.
If the flag is on, the first thing porechop.py does is to parse the CSV file into a list of Adapter objects, then append that list to the end of the list of Adapters from adapter.py.